Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04924 ATGGCCTTCCAACTTGGAGCAAGAGTTAATGGAATCACCCCAAACAGTTTGGAGATTGATATTCCTATGCATGCAAATAGAACTCTCAAAACTGATAAAGAAAGCAACAACATTGATTACTTTCAAAGAGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGACTAATCACTGTTGCCTCATTGATGATTGGTGTTGGAGCTATAAAAGAAGACATCAGTGTGATGCTTCTTGCAGGTTTTGCTGGTTTGGTAGCTGGTGCTTGTAGCATGGCGATCGGTGAGTTTGTGTCTGTGTATACACAATATGACATAGAGGTAGCTCAGATAAAAAGAGAAAGAGAAGCTAATGATAATAATAATGGAGTAGTTGATGATGAAAGTACTGAAAGGGAGAAATTGCCGAATCCATTTCAGGCAGCCTTGGCATCAGCACTGGCATTTTCTGTTGGTGCTGTTATGCCATTGCTAGCAGCTGCATTTATAAAGGATCATAAGGTTAGGATGGGTGTTGTTGCTGCTGTTGTTAGCATGGCACTGTTAGTGTTTGGAGGAGTTGGAGCATTGGTTGGAAAAACACCAGTGATGAGGTCTTGTGTTAGGGTTCTTATTGGTGGTTGGATGGCTATGGCCATTACTTTTGGTTTCACCAAACTCATTGGCACTACTGGACTTTGA 684 0.4196 MAFQLGARVNGITPNSLEIDIPMHANRTLKTDKESNNIDYFQRAQWLRAAMLGANDGLITVASLMIGVGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEVAQIKREREANDNNNGVVDDESTEREKLPNPFQAALASALAFSVGAVMPLLAAAFIKDHKVRMGVVAAVVSMALLVFGGVGALVGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04924 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 222 IPR008217 GO:0005384|GO:0030026
Vivi5g04924 227 Pfam VIT family 132 219 IPR008217 GO:0005384|GO:0030026
Vivi5g04924 227 Pfam VIT family 47 124 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04924 Vivi-Chr5 149472196 149473106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04924 26 227 Nodulin-like Gene Family AT3G43660 63.366 1.49e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04924 K22736 - gmx:100802489 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04924 5 149472196 149473106 Vivi5g04924 5 149472196 149473106 ECH