Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04923 ATGGCCTGTAACCTTGAAGCAAAAACTAATGGAATCTCACCTAACAGTTTTGATATCGAGATACCCATCCGTGCAAATAAAGAAAGTGTTGAAAACGAGAGTAACATTAATTACTTTCAAAGGGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAATGACGGATTAATCACTGTTGCCTCAATGATGATCGGTATCGGAGCTATAAAAGAGGACATCGGTGTAATGATCCTTACTGGTTTTGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCTATTGGCGAGTTTGTCTCTGTGTATACTCAATACGACATAGAGATAGCTCAAATGAAAAGAGAAAGAGAAGCTAATAGTAATAATACTAATGGAGTAGTTGATGATGAAAGTACTGAAAGGGAGAAATTGCCGAATCCGTTTCAAGCGGCATTGGCATCGGCACTAGCATTTTCTGTTGGTGCTGTTATGCCATTGCTAGCAGCTTCATTTATAAGGAATCATAAGATGAGGATGGGTGTTGTTGGCGGTGTTGTTAGCATGGCACTGTTAGTGTTTGGAGGAGTTGGAGCATTGGTTGGAAAAACTCCAGTGATGAAGTCTTGTGTTAGGGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACATTTGGTTTCACCAAATTGATTGGCAGAACTGGAATTTGA 681 0.4141 MACNLEAKTNGISPNSFDIEIPIRANKESVENESNINYFQRAQWLRAAMLGANDGLITVASMMIGIGAIKEDIGVMILTGFAGLVAGACSMAIGEFVSVYTQYDIEIAQMKREREANSNNTNGVVDDESTEREKLPNPFQAALASALAFSVGAVMPLLAASFIRNHKMRMGVVGGVVSMALLVFGGVGALVGKTPVMKSCVRVLIGGWMAMAITFGFTKLIGRTGI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04923 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 221 IPR008217 GO:0005384|GO:0030026
Vivi5g04923 226 Pfam VIT family 131 218 IPR008217 GO:0005384|GO:0030026
Vivi5g04923 226 Pfam VIT family 45 122 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04923 Vivi-Chr5 149434274 149435259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04923 31 226 Nodulin-like Gene Family AT3G43660 61.735 1.63e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04923 K22736 - gmx:100802489 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04923 5 149434274 149435259 Vivi5g04923 5 149434274 149435259 ECH