Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04922 ATGGCTGTTGGTACAATATGTGATTCTGAATCACTCAACCATGTAGCCACAAATCCAAATCTTCCAAAAGAAATAGATGAAAAGAAAATCCAAGTCACTGAAAATAATAACCACAACACTGATATTAATTATTGGCAAAGGGCTCAATGGCTTCGCGCCGCGGTATTAGGAGCTAACGACGGATTAGTTTCGGTTGCATCACTAATGATGGGCGTAGGTGCGGTTAAAAAAGACATCACAGCAATGTTGGTAGCGGGCTTTGCAGGACTAGTCGCTGGAGCGTGTGGTATGGGAATAGGAGAATTTGTTTCTGTTTACACACAATATGAAGTTGAAGTAGGTCAAATGATGAGAGAGATAGGAACAAGTGATAGATCAGAGAAAAAGCTTGAGAATGAGTTGGAGAAGAGAAAATCATTGCCTAATCCAATGCAAGCTGCTTCAGCTTCTGCGTTTTCGTTCTCGATTGGTGGTTTGGTTCCTTTGCTTTGTGGTTCATTTATAAGTGATTATAAGATTAGGCTTATTGTGATGGTTGCTATATCAAGTTTTGCTTTGGTGGTTTTTGGAAGAGTTGGTGCTGAGCTTGGTAAGACACCAAAGTTGAAAACTTCTATTAGGTTTCTTCTTGGTGGATGGATGGCTATGGCTATCACTTTTGGGTTAACTAAATTACTTGCACATTGTAGTGGTTTGGATTTGGATATCTGA 711 0.398 MAVGTICDSESLNHVATNPNLPKEIDEKKIQVTENNNHNTDINYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDITAMLVAGFAGLVAGACGMGIGEFVSVYTQYEVEVGQMMREIGTSDRSEKKLENELEKRKSLPNPMQAASASAFSFSIGGLVPLLCGSFISDYKIRLIVMVAISSFALVVFGRVGAELGKTPKLKTSIRFLLGGWMAMAITFGLTKLLAHCSGLDLDI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04922 236 CDD Nodulin-21 49 201 - -
Vivi5g04922 236 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 228 IPR008217 GO:0005384|GO:0030026
Vivi5g04922 236 Pfam VIT family 127 223 IPR008217 GO:0005384|GO:0030026
Vivi5g04922 236 Pfam VIT family 51 134 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04922 Vivi-Chr5 149430578 149431661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04922 33 226 Nodulin-like Gene Family AT3G43660 56.931 1.78e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04922 K22736 - gmx:100791523 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04922 5 149430578 149431661 Vivi5g04922 5 149430578 149431661 ECH