Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04918 ATGAATACATGGAAAATCTTGCGAGAGTTGAAACCAGTAGTGCTGATGGTTTTGGTGCAAATTGCATATGCTGCTGCGAATGTGTTTTACAAAATTGCTACAAATGATGGTATGAGTATTAGGGTAGTCACTTCCTATCGTCTCATTGTTGGAGCTGCCTTCTCTTTTCCTCTTGCTCTTGTTCTTGAGAGAAAAAATAGGCCAAAATTGACAAGGAGGGTGCTTTTTATGTCATTTTGTTGCGGTCTATTCGGAGGGAGTTTATTTCAAAACCTCTTTTTCACTGCATTGGCTTTGGTATCAGCAACATTTGCTTCTGCTGTTTATAATCTCATTCCTGTCATCACTTTCATCCTTGCCGTCTTGTGCCGCTTAGAAAGGTTAAATATGGGAACCATCGCAGGGAAGGTAACGATATTGGGAACAATAACAGGAGTTGTTGGGTCAATGATTCTGATATTTTTCAAAGGAGTAGAAATCAACATTTGGAATGTCCACATCAATCTTTTGCATGGTAACCAAAATAATAACCACGTAGGAACAACTAATGCTGACAGCATACAAAGAATTGTCGGTGTTTTATGTGGTCTTGGAAGCTGTTTTAGTTTTTCATTATGGCTCATTATTCACACTAAGATGTGTAAGGAGTATCCATGTTATTACTCAAGCACAACATTGATGAATCTAATGGGAGCAATACAGGCCACAATCTTTGCCCTTTGTGTTGAGAAAGATTTGAATCAATGGAAATTGGGTTGGAATTTCAGACTTCTAACTGCAGCTTATTCGGGAATTGTGACATCTGGATTAGTGTTTATTGTGACAGCATGGTGTGTAAGGAAGAAAGGTCCAGTGTATGCATCTGCATTCAACCCTCTTAATCTTTTGATTGTGGCTATTGCTGCTTCGTTGTTGTTAGATGAGACTCTCTATGTAGGAAGTGTAATTGGAGGTGTGCTAATTGTGGGTGGCTTGTACATGGTGTTATGGGGTAAGAGCAAAGAAACAAACTTCATTGCCAAAGATTTTGAAGGGTCAACTGAGGTTGTTGTTATGTGCAAGACATCAGATCATGACTCGGTCACTGAAGCAACAATAGCCTCACCAAACACTAGGAGCAATTCTATTGTTACATAG 1137 0.3923 MNTWKILRELKPVVLMVLVQIAYAAANVFYKIATNDGMSIRVVTSYRLIVGAAFSFPLALVLERKNRPKLTRRVLFMSFCCGLFGGSLFQNLFFTALALVSATFASAVYNLIPVITFILAVLCRLERLNMGTIAGKVTILGTITGVVGSMILIFFKGVEINIWNVHINLLHGNQNNNHVGTTNADSIQRIVGVLCGLGSCFSFSLWLIIHTKMCKEYPCYYSSTTLMNLMGAIQATIFALCVEKDLNQWKLGWNFRLLTAAYSGIVTSGLVFIVTAWCVRKKGPVYASAFNPLNLLIVAIAASLLLDETLYVGSVIGGVLIVGGLYMVLWGKSKETNFIAKDFEGSTEVVVMCKTSDHDSVTEATIASPNTRSNSIVT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04918 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 334 - -
Vivi5g04918 378 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0016020|GO:0022857
Vivi5g04918 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 146 - -
Vivi5g04918 378 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020
Vivi5g04918 378 Pfam EamA-like transporter family 11 146 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04918 Vivi-Chr5 149347388 149350567 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04918 5 365 Nodulin-like Gene Family AT1G68170 41.828 9.37e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04918 - - gmx:100815160 431.795