Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04916 ATGGGAAGCATTTGGGATATGTTGAAGCCAGCTTTATTAATGGTTTCGGTGCAATTAGTATTTTCAGCTTGCAATGTTCTTTACAAACTTGCCATTTTTGATGGAATGAGTACCGTTGTTATTGCTGCTTATCGTCTTGCCTTTGCTGCGATTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGAAGAGGCCGCAGATGACTTGGAGGGTGTTTTACCTTTCACTTTTAAGTGCATTATTTGCTGCATTATTATTTCAAAACCTATTCTATGGAGCTCTGATTTTGGCATCAGCAACTCTTGTATCAGCTATCTACAACCTTATTCCCACAATCACCTTTGTATTAGCTGTATCCTTCGGTTTAGAGAAATTAAATTGGGGAGCACCTTCAGGTAAAGCAAAGGTTACAGGAACTATACTCGGACTTGCAGGAGCTCTACTTCTGACATTTTACAAAGGAGTTGAATTTGAAATTTGGCCTTTTAAAATCAATCTTTTGGATCCAAAAGACAACCAAATAGAACTTGTCACTGATACTGCCTCTGAGTTGTTAGGTGTTCTGTGTGTTGTTCTTAGTTGCTTCTGTTTCTCAATCTGGCTCATCATTCAGGCTAAGATCAGTGAAGTATATCCATGTCCTCAATCAAGCATAGCTTTGATGTCTGTAATAGGAACAGTACAATGTTTTATTTTAGGTTTCATTGTTGAGAGAGATTTGGATCAATGGAAACTTGGTTGGGATATCAGGCTTCTCACTGTCGCGTTTTCGGGAATTGGAGCCTCAGGACTAATGATTCTTACCATGGCATGGGTCGTACAGACGAAAGGCCCTTTGTATGCATCCGCTTTCAACCCTCTAATGCTTTTGATTGTGGCTATCGTCGCGTCTATGGTTTTGGATGAGAATTTAAACTTAGGAAGTTTACTTGGAGGAGTGTTGATTGTGTGTGGCTTATACACTGTACTTTGGGGTAAAGCAAGAGAACAAAAGAAGAAGATTGCACAAGCACCATCAGAAATCATTGGTGATCTCGAAGCTACGACGCCATTGTTGAGCCCATGA 1065 0.3991 MGSIWDMLKPALLMVSVQLVFSACNVLYKLAIFDGMSTVVIAAYRLAFAAITTIPLALIFERKRPQMTWRVFYLSLLSALFAALLFQNLFYGALILASATLVSAIYNLIPTITFVLAVSFGLEKLNWGAPSGKAKVTGTILGLAGALLLTFYKGVEFEIWPFKINLLDPKDNQIELVTDTASELLGVLCVVLSCFCFSIWLIIQAKISEVYPCPQSSIALMSVIGTVQCFILGFIVERDLDQWKLGWDIRLLTVAFSGIGASGLMILTMAWVVQTKGPLYASAFNPLMLLIVAIVASMVLDENLNLGSLLGGVLIVCGLYTVLWGKAREQKKKIAQAPSEIIGDLEATTPLLSP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04916 354 PANTHER WAT1-RELATED PROTEIN 10 330 IPR030184 GO:0016020|GO:0022857
Vivi5g04916 354 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Vivi5g04916 354 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Vivi5g04916 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Vivi5g04916 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04916 Vivi-Chr5 149271351 149277871 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04916 8 331 Nodulin-like Gene Family AT1G25270 40.308 2.23e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04916 - - mtr:25493309 563.533