Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04904 ATGGGAGGCATGTGGGATATGTTGAAGCCAGCTTTGTTAATGGTTTCGGTGCAAATAGTATTTTCAGCTTGCAATGTTCTTTACAAACTTGCCATTTTTAATGGTATGAGCACCATTGTTATTGCAGCTTATCGTATGGCCTTTGCTGCGATTACTACTATTCTTCTTGCTCTTATTTTTGAAAGGAAGAGGCCGAAGATGACATGGAGGGTGTTTATCCTTTCACTTCTAAGTGGATTATTTATTGGAACATTATTCCAAAATCTATTCTATGGAGCTCTGGTTTTGGCTTCAGCAACTCTTGTATCAGCTATCTACAATCTTATTCCCTCCATCACTTTTGTCTTGGCTGTATGCTTCGGCTTGGAGAAATTAAATTGGGGAGCAGCAACTGGAAAGGCAAAGGTGACAGGAACTATACTTGGACTTGCTGGGGCTCTACTTCTGACATTTTACAAAGGAGTTGAATTTGAAATTTGGCCTTTTGAAATCAACCTTTTGGATCCAACAAACAACGAAGTAGGACCTAACGAATTAGAACCTATCACTGAATCTACCTCTGAATTGTTAGGTGTTCTATGTGCTGTAATTAGTTGTTTTGCTTTCTCTATCTGGCTCATAATTCAGGCTAAGATTAGTGAAGTATATCCATGTCCTCAATCAAGTATAGCTTTGTCGTCTGTATTAGGAACAATACAATGTGTTGTTTTTGGTTTTATTGTTGAGAGAGATTTGAACCAATGGAAGCTTGATTTGGATATCCGGCTACTGACCGTTGCTTTTTCGGGAATTGGAGCCTCTGGAATAATGGTTTTTGTCATGGCGTGGGTTGTCCAGACGAAAGGCCCTATATATGCGTCGGCTTTCAACCCTCTAATGCTTTTGATTGTGGCTCTCGTCGCATCTATGATTTTGGATGAGAAGTTAAACTTAGGAAGTATACTCGGAGGAGTGTTGATTATATGTGGCCTATACACTGTATTATGGGGTAAAGGAAGAGAAACAAAGAAGAGTGTACAAGCACCCTCAGAAACCATTCCCGATTTCGAAGATACTACGACACCATTGTTGAATCCATGA 1080 0.3972 MGGMWDMLKPALLMVSVQIVFSACNVLYKLAIFNGMSTIVIAAYRMAFAAITTILLALIFERKRPKMTWRVFILSLLSGLFIGTLFQNLFYGALVLASATLVSAIYNLIPSITFVLAVCFGLEKLNWGAATGKAKVTGTILGLAGALLLTFYKGVEFEIWPFEINLLDPTNNEVGPNELEPITESTSELLGVLCAVISCFAFSIWLIIQAKISEVYPCPQSSIALSSVLGTIQCVVFGFIVERDLNQWKLDLDIRLLTVAFSGIGASGIMVFVMAWVVQTKGPIYASAFNPLMLLIVALVASMILDEKLNLGSILGGVLIICGLYTVLWGKGRETKKSVQAPSETIPDFEDTTTPLLNP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04904 359 PANTHER WAT1-RELATED PROTEIN 10 335 IPR030184 GO:0016020|GO:0022857
Vivi5g04904 359 MobiDBLite consensus disorder prediction 339 359 - -
Vivi5g04904 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 333 - -
Vivi5g04904 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Vivi5g04904 359 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Vivi5g04904 359 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04904 Vivi-Chr5 149034056 149048335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04904 8 352 Nodulin-like Gene Family AT1G25270 37.572 7.23e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04904 - - mtr:25493309 538.495