Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04901 ATGTGGGATATCAGTAGTATATGGCAGAGGTTGAAACCAGACGTGGTAATGGTGCTTATACAGATTGCATATGCTGTGATGACTATAATATACAAGCTCGCAATAAATGATGGAATGAGCATGAGAGTAGCCGCGGCATATCGTCTTATTTGTGCATCCGCTTTCACTGTTCTAGTTGCTCTTATCTTTGATAGGAAGAATAGAGCAAAGATTACTTGGAGTGTGCTTTTTAAGTCATTTCTATGTGGATTGTTTGGGGGAAGTTTGTTTCTCAACCTTTATCTTGTTGGTTTGGCTTTGACGTCAGCAACATTTATGTTGGTCGTCATCAACCTAATTCCAGCCATCACCTTCATCATGGCTGTATGTTTCAGAATGGATAAATTCAATTTAAGGGTAGCAGAAGGAAAGGCGAAAGTGATTGGAACAATAATGGGAATAGGTGGTGCAATGTTGATGATATTTTTCAAAGGTGCAGAAATTCATATTTGGTCTTCTAATACCAATCTTTTGCATCCACATCACAATCAAAATAAACAAATGGCAACTCATCATGCTGACTTTGGTAAAAAATTGTTGGGTGTTTCATGTGCACTTGCAAGCAGTTGCTCCTTCTCATTATGGTATATTATTCAGGCTAAGTTGAATAAAGAATACTCAAGTCATCGCTCAAGTGCAGCTTTAATGTCCACAATGGGAGCCATTCAAGGAACTATTATTGCTCTTTGTTTTGAAAGGGATTGGGAACAATGGAAACTACAAAACAATCTCAGAATTCTTGCCGTTATATATCCAGGAATTGTGGCCTCTGGTTTAGTTGTTATTGCTATGGCTTGGTGCATAAAGATGAGGGGCCCTGTATTTGCATCTATTTTCAGTCCTTTACAACTCTTACTTGTAGTTATAGCTGCTTATTTCATGTTGGATGAAAAATTATATTTGGGAAGCATGCTTGGAGCAATTGTGATTGTGTGTGGTCTCTATGCGGTACTTTGGGGTCAAAGCAAAGAATTGAAAAAGAAAAAGATGATATTAGAAATTACAAGAATGCCTGAAAATGATGAGCTTGTTGTTATTTCCACGCCTGCTATTTCCCATGACAAAGTCGTCCAAACCTACACGAGTTCAGCCATTACTAAAGATAATGTTGTTAATGAGCAATTACCTTGA 1170 0.3778 MWDISSIWQRLKPDVVMVLIQIAYAVMTIIYKLAINDGMSMRVAAAYRLICASAFTVLVALIFDRKNRAKITWSVLFKSFLCGLFGGSLFLNLYLVGLALTSATFMLVVINLIPAITFIMAVCFRMDKFNLRVAEGKAKVIGTIMGIGGAMLMIFFKGAEIHIWSSNTNLLHPHHNQNKQMATHHADFGKKLLGVSCALASSCSFSLWYIIQAKLNKEYSSHRSSAALMSTMGAIQGTIIALCFERDWEQWKLQNNLRILAVIYPGIVASGLVVIAMAWCIKMRGPVFASIFSPLQLLLVVIAAYFMLDEKLYLGSMLGAIVIVCGLYAVLWGQSKELKKKKMILEITRMPENDELVVISTPAISHDKVVQTYTSSAITKDNVVNEQLP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04901 389 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Vivi5g04901 389 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vivi5g04901 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 335 - -
Vivi5g04901 389 PANTHER WAT1-RELATED PROTEIN 15 338 IPR030184 GO:0016020|GO:0022857
Vivi5g04901 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04901 Vivi-Chr5 148813858 148817780 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04901 11 367 Nodulin-like Gene Family AT1G25270 40.223 4.06e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04901 - - gsj:114424758 453.366