Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04899 ATGGAGAGCAAAAGTAGTATATGGCAAGGGTTGAAACCAGACTTGCTAATGGTGTTAGTACAGATTGCATATGCTGTGGTGACTATAATATACAAGCTTGCAATAAATGATGGAATGAGCATGAGAGTAGCCTCGGCATATCGCCTCATTTGTGCATCCGCTTTCACTATCCCGATTGCTCTTTTCTTTGATAGGAAGAAGAGAGAAAAGATTACTTGGAGTGTGCTTTCTAAGACATTTCTATGTGGATTGTTTGGCGGAAGTTTGTATCTAAACCTTTACCTAGAAGCTCTGGCTTTGACGTCAGCAACATTTATGTTGGTCGTCTTCAACTTAATTCCAGCCATTACCTTCATCATGGCTGTGTGTTTCGGAATGGATAAGTTCAATTTGAAGGTTGTGGAAGGAAAGGCCAAGATAATAGGAACATTACTAGGAATTAGTGGTGCAATGTTGATGATTTTTTTCAAAGGTGCAGAAATTCATATTTGGTCTTCCAATATCAACCTTTCGCATCCACATCACCCAAATGAGCAAATGGTATCTCGCCATGCTGACTTTGGTAAGAAATTGTTGGGTGTTTCAATTGCATTAGCAAGCAGTTGCTCTTTCTCATTGTGGTATATTATTCAGGCTAAGTTGAATGAGGAATACTCAAGTCATCGCTCAAGTGCAGCTTTAATATCCATAATGGGAGCCATTCAAGCAACTGCAATAGCACTTTGTGTTGAAAGAGATTGGGAACAGTGGAAGCTTGGAAATAACCTCAGGATTTTTGCCGTTGTTTATCCAGGAATTGTGACCTCTGGATTAGTTGTTATCGCTACGGCGTGGTGCATAAAGATAAGGGGTCCTCTATTTGCATCTATTTTCAGCCCTTTACAACTCTTTCTTGTAGTTATAGCTGCTTATTTCATGTTGGATGAGAAATTATATTTGGGAAGCATGCTTGGAGCAATGGTGATTGTGTGTGGTCTCTATGCGGTACTTTGGGGTCAAAGCAAAGAAACAAAAAATAAAGTGAAGATATTAGAAATCACAAGAATGCCTGAAAATGACGAGCTTGTTGTTATTTCTATGCCTGTTTCCCACGATAGAGTCATCCAAAGCTAG 1113 0.3953 MESKSSIWQGLKPDLLMVLVQIAYAVVTIIYKLAINDGMSMRVASAYRLICASAFTIPIALFFDRKKREKITWSVLSKTFLCGLFGGSLYLNLYLEALALTSATFMLVVFNLIPAITFIMAVCFGMDKFNLKVVEGKAKIIGTLLGISGAMLMIFFKGAEIHIWSSNINLSHPHHPNEQMVSRHADFGKKLLGVSIALASSCSFSLWYIIQAKLNEEYSSHRSSAALISIMGAIQATAIALCVERDWEQWKLGNNLRIFAVVYPGIVTSGLVVIATAWCIKIRGPLFASIFSPLQLFLVVIAAYFMLDEKLYLGSMLGAMVIVCGLYAVLWGQSKETKNKVKILEITRMPENDELVVISMPVSHDRVIQS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04899 370 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Vivi5g04899 370 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Vivi5g04899 370 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
Vivi5g04899 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Vivi5g04899 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04899 Vivi-Chr5 148745454 148747366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04899 11 354 Nodulin-like Gene Family AT1G25270 39.826 2.16e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04899 - - gmx:100803545 463.381