Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04897 ATGAAGGACATAAGAAGTATATTGCATGGGTTGAAACCAGATTTTCTAATGGTGTTAGTACAGATTGCATATGCTATGCTAACTATATTATACAAGCTCACACTAAATGATGGAATGAGCATGAGAGTAGCCGCAGCATATCGCCTCATTTGTGCATCTGCTTTCACTATCCCAGTTGCTCTTATCTTTGATAGGAAGAAGAGAGCAAAGATTACTTGGAGTGTGCTTTCGAAAACATTTCTATGTGGATTGTTTGGGGGAAGTTTGTATCAAAACCTTTACCTCGAGGCTCTTGGTTTGACGACAGCAACATTTATGATGGTAGTCTTCAACCTACTACCGGCCATTACCTTCATCATAGCTGTATGCTTCGGAATGGATAAACTCAACTTGAGGGTAGTAGAAGGAAAGGCGAAAGTGATAGGAACTATAATGGGAATGAGTGGTGCAATGTTGATTATATTTTTCAAAGGTGCAGAAATTCATATTTGGTCTTCCAATATCAATCTTTTGCATCCACATCACAATACAAATGAGCAAATGGAATCTAAACATGAAGACCTTGGTAAAAAATTGTTGGGTGTTACAATTGCACTAGCAAGCACCATCTCTTTCTCTATGTGGCTTATCATTCAGGCTAAGTTGAATGAGGAATACCCTTGTCATCACTCATGTGCTGCTTTAAATGCCACAATGGGAGCTATTCAAGCAACTGTTATTGCTCTATGCGTTGAAAGGGACTGGAACCAATGGAAGCTAGAAAACAACCTCAGGATTCTTGCCGTTCTTTATCCGGGAATTGTGATCTCAGGATTAGCAGTTATCATTACTTCCTGGTGCATAAAGATGAGGGGACCTCTATTTGCGTCTAATTTCAATCCTCTACAACTCTTAATTGTAGCTATAACTGCTTATTTCATGTTGGATGAAAAACTATATTTGGGAAGCTTGCTTGGAGCAATTGTGATTGTGTGCAGTCTCTATGCGGTACTTTGGGGTCAAAGCAAAGAAATGAAAAATAAAAAGAAGATATTAGAAATTACAAGAATGTCTGAAAATGATGAGCCTACTGTTATTTCCATGCCTGTTCCACATGACAGAGTCATCCAAAGCTACCAGAGTTCCCCCATTACAAAAGAGAATATTGTTAATGATAAATAA 1161 0.3833 MKDIRSILHGLKPDFLMVLVQIAYAMLTILYKLTLNDGMSMRVAAAYRLICASAFTIPVALIFDRKKRAKITWSVLSKTFLCGLFGGSLYQNLYLEALGLTTATFMMVVFNLLPAITFIIAVCFGMDKLNLRVVEGKAKVIGTIMGMSGAMLIIFFKGAEIHIWSSNINLLHPHHNTNEQMESKHEDLGKKLLGVTIALASTISFSMWLIIQAKLNEEYPCHHSCAALNATMGAIQATVIALCVERDWNQWKLENNLRILAVLYPGIVISGLAVIITSWCIKMRGPLFASNFNPLQLLIVAITAYFMLDEKLYLGSLLGAIVIVCSLYAVLWGQSKEMKNKKKILEITRMSENDEPTVISMPVPHDRVIQSYQSSPITKENIVNDK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04897 386 PANTHER WAT1-RELATED PROTEIN 15 343 IPR030184 GO:0016020|GO:0022857
Vivi5g04897 386 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vivi5g04897 386 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Vivi5g04897 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 336 - -
Vivi5g04897 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04897 Vivi-Chr5 148712082 148714567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04897 17 355 Nodulin-like Gene Family AT1G25270 39.823 2.16e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04897 - - gsj:114424758 459.144