Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04896 ATGTTGGTCGTCTTTAACCTAATTCCAGCCATTACATTCATCATGGCTGTATGCTTCGGAATGGATAAATTCAATTTGAGGCTACCAGAAGGAAAGGCAAAAGTGATAGGAACCTTAATGGGAATTAGTGGTGCAATGTTGATTATTTTTTTCAAAGGTGCAGAAATTCATATTTGGTCTTCCAATATCAATCTTTTGCATCCACATCACAACCACAATGACCAAATGGAATCTCACCATAATGGCATTCTTAAAAAATTGTTGGGTGTTTCAATTGCACTAGCAAGCAGCTGCTCTTTATCTTTGTGGATTATCATTCAGGCTAAGTTGAATAAGGAATACCCAAGTCAACACTCAAATGCAGCTTTAATGGCTACAATGGGAGCTATTCAAGCAACTGTTATTGCTCTATGTATTGAAAAGGATTGGAACCAATGGAAGCTAGGAAACAACCTCAGGATTCTTACCGTTGTTTATCCGGGAATTGTGGTGTCTGGATTAACTCTTATCATTATGAACTGGTGCATAAAGATAAGGGGTCCTCTATTTGCATCTATTTTCAATCCTTTGCAACTCTTACTTGTAGTTATAGCTGCTTATTTGATGTTGGATGAAAAATTATATTTGGGAAGCATGCTTGGAGCAATTGTAATTGTATGCGGTCTCTATGCGGTACTTTGGGGTCAAGGCAGAGAAATAAAAAATAAAATGAAGATATTAGAAATCACAAGAATGTTTGAAAACGAGGAGCCTATTGTTATTTCCATGCCTGTTTCCTATGATAGAGTCATCAAACCCTATCAAAGTTCAGCCATTCCTAAAGAGAATGTTCTTAATGATCAGTGA 846 0.3676 MLVVFNLIPAITFIMAVCFGMDKFNLRLPEGKAKVIGTLMGISGAMLIIFFKGAEIHIWSSNINLLHPHHNHNDQMESHHNGILKKLLGVSIALASSCSLSLWIIIQAKLNKEYPSQHSNAALMATMGAIQATVIALCIEKDWNQWKLGNNLRILTVVYPGIVVSGLTLIIMNWCIKIRGPLFASIFNPLQLLLVVIAAYLMLDEKLYLGSMLGAIVIVCGLYAVLWGQGREIKNKMKILEITRMFENEEPIVISMPVSYDRVIKPYQSSAIPKENVLNDQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04896 281 Pfam EamA-like transporter family 88 226 IPR000620 GO:0016020
Vivi5g04896 281 PANTHER WAT1-RELATED PROTEIN 5 233 IPR030184 GO:0016020|GO:0022857
Vivi5g04896 281 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04896 Vivi-Chr5 148679952 148683433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04896 7 238 Nodulin-like Gene Family AT1G68170 40.086 5.89e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04896 - - vvo:131605704 386.726