Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04894 ATGGAGAGCATGAGTAGTATATGGCAGGGGTTGAAACCAGATGTGCTAATGGTGTTTGTACAAATATCAATAGCTGCTGTGAACATAATATACAAACTTGCAATAAATGATGGAATGAGCATGAGAGTTGCCACTGCTTATCGTCTCATCATTGCAGCAGCTTTCACTATCCCAATTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGTGTGCTTTCTAAGTCATTTCTATGTGGATTGTTTGGGGGAAGTTTGTATCTAAATCTTTACCTCGAGGCTCTGGCTTTGACATCGGCAACGTTTATGTTGGCCATCGTCAACCTAATTCCAGCCATTACCTTCATGATGGCTGTATGCTTGAGAATGGATAAATTAAATTTGAGGGTGATAGAAGGAAAGGCAAAGGTGATAGGAACAGTAATGGGAATAAGTGGAGCAATGTTGATGCTTTTTTTCAAAGGTGCAGAGATTCATATTTGGTCTTCCAATATCAACCTTTTGCATCCACATCACAACCAAAATGAACAAATGGCATCTCACCATGCCGACCTTCGTAAAAAATTGTTGGGTGTTTCAATTGCACTGCTAAGCAGTTGCTCTTTCTCTATGTGGTTTATCATTCAGGCTAAGTTGAATGAGGAATACCCTTGTCATCACTCAAGTGCAGCTTTAATGTCTACAATGGGAGCCATTCAAGGAACTATTATTGCTTTTTGTGTAGACAGGGATTTGAATCAATGGAAACTAGGAAACACCCTCAGGATTCTTACCGTTGTTTATCCGGGAATTGTGGTGTCTGGATTAGCAGTTATCATGATTGCGTGGTGCATAAAGATGAGAGGACCTCTATTTGCATCTATTTTCAATCCTTTACAACTCTTACTCGTAGTTATAGCTGCTTATTTGATGTTGGATGAGAAATTATTTTTGGGAAGCATGCTTGGAGCAATGATGATTGTTTGCGGACTCTACGCCGTACTTTGGGGACAAAGCAAAGAAATGAAAAAGAAAACGAAGATATTAATAGAGCCACTAGAAATCACAAGAAAAACCGAGAATGTTGAGCTTGTTGTTATTACCGTGCCGGTTCACAATGATAAAGTTATCCAAAACTACAAAAATTAA 1137 0.3887 MESMSSIWQGLKPDVLMVFVQISIAAVNIIYKLAINDGMSMRVATAYRLIIAAAFTIPIALIFDRKKRPKITWSVLSKSFLCGLFGGSLYLNLYLEALALTSATFMLAIVNLIPAITFMMAVCLRMDKLNLRVIEGKAKVIGTVMGISGAMLMLFFKGAEIHIWSSNINLLHPHHNQNEQMASHHADLRKKLLGVSIALLSSCSFSMWFIIQAKLNEEYPCHHSSAALMSTMGAIQGTIIAFCVDRDLNQWKLGNTLRILTVVYPGIVVSGLAVIMIAWCIKMRGPLFASIFNPLQLLLVVIAAYLMLDEKLFLGSMLGAMMIVCGLYAVLWGQSKEMKKKTKILIEPLEITRKTENVELVVITVPVHNDKVIQNYKN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04894 378 PANTHER WAT1-RELATED PROTEIN 13 341 IPR030184 GO:0016020|GO:0022857
Vivi5g04894 378 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Vivi5g04894 378 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vivi5g04894 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Vivi5g04894 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04894 Vivi-Chr5 148524882 148527945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04894 11 360 Nodulin-like Gene Family AT1G25270 40.286 5.37e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04894 - - gsj:114424758 492.271