Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04890 ATGGTGCTGCTTTTATTAATTATTTGGTGTGTTAAACATTGGAAAAAAACTAAAATTAATTTAAGTTTGTTATTGAAAAATATGGTTAATTTATTCAGTGTTGAAGCCATAGAGAGTGCAAAGCCTATTGTGTTGATGATAGTGGTTCAATCAATATATGCAGTTGTTAATATAATGTTAAAAATGGTAACAAATGATGGATCAAGCTTAAGTATTCTTATTGTTTATAGATTTGTATTTTCTACTGCCTTCACTGTGCCATTAGTTTTCTTCTTTGAAAGAAAAAGTGTGCAAAATTTGACTGGAAAGGTGCTATTCCAAGCATTTCTTTGTGGATTATTTGGGGGATCATTACAACAAAACTTGTATATTAAATCTTTGGCTTTGGTATCTGCAACATATACTATAACCATGTTAAACCTCATTCCTGCCATTACCTATGTTCTGGCTGTTTCTCTAAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAGGCAAAGTTGATGGGAACATTAAGTGGAATTTGTGGTGCAATGATCCTCACTTTATATGAAGGCAAAAGATTATTTAACTTATCATTGCACATTGATTTGTTGCAAAATGTTACATCAACAACACATCATTCCCCTGCTGGTTCTCATGTTTGGGGACTCATGCTAGCTTTAGGCACTGCTCTCAGTTTCTCATTATGGTTTATAACACAGTCGAAGATGAGTGAGAATTTTCCGTGGCATTATTCAATTGCGGCTTTAACCTCTATAATGGGCACAATCCAGTCTTTTATATTTGCTGTTTGTACCGAGAGAGATTGGAGCCAATGGAAGCTTGATTGGAATTTGAGGCTTTTGACAGCAGCATCCACGGGTATATTGGCCTCAGGAGTGTGCTTTGTTCTGTTGGCTTGGTGTGTGGGCATGAAAGGACCCTTGTATGTGTCTGCTTTTAATCCTCTAATGCTTGTTCTCGTGGCTTTCATTTCGTCGTTCGTATTGAACGAGTACATTACGGTCGGAAGTCTAACAGGAGCCGCGTTGATTGTTTGTGGATTGTACATGTTATTATGGGGTAAAAGCAAAGAAGCGAGAAAAATGCATAATATGAATGAAATAGCTTCTGCAATAGACACTGTTAAATGTGATTCATTTCACATTGCCAATAACTCGGCTTTATCTTGCATACAGAAGGAGCATGACAAGAAGATCGCAACTTTTGCTCCCGATGTATCACTAAATGTCAACAATAACACTTTAGGCGAAATCCAAAAATCGAACATTTGA 1281 0.3677 MVLLLLIIWCVKHWKKTKINLSLLLKNMVNLFSVEAIESAKPIVLMIVVQSIYAVVNIMLKMVTNDGSSLSILIVYRFVFSTAFTVPLVFFFERKSVQNLTGKVLFQAFLCGLFGGSLQQNLYIKSLALVSATYTITMLNLIPAITYVLAVSLRMEKPNLGTPAGKAKLMGTLSGICGAMILTLYEGKRLFNLSLHIDLLQNVTSTTHHSPAGSHVWGLMLALGTALSFSLWFITQSKMSENFPWHYSIAALTSIMGTIQSFIFAVCTERDWSQWKLDWNLRLLTAASTGILASGVCFVLLAWCVGMKGPLYVSAFNPLMLVLVAFISSFVLNEYITVGSLTGAALIVCGLYMLLWGKSKEARKMHNMNEIASAIDTVKCDSFHIANNSALSCIQKEHDKKIATFAPDVSLNVNNNTLGEIQKSNI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04890 426 Pfam EamA-like transporter family 41 165 IPR000620 GO:0016020
Vivi5g04890 426 Pfam EamA-like transporter family 217 355 IPR000620 GO:0016020
Vivi5g04890 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 186 - -
Vivi5g04890 426 PANTHER WAT1-RELATED PROTEIN 41 368 IPR030184 GO:0016020|GO:0022857
Vivi5g04890 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 277 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04890 Vivi-Chr5 148425547 148427714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04890 41 370 Nodulin-like Gene Family AT1G25270 37.952 1.68e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04890 - - vvo:131607733 840.491