Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04889 ATGGCCAAGAACATCCTCAAAACTCCAGCACTTCTTCAGTACATCCTTGAAACAAGTTCATATCCAAAAGAGCATGAACAATTGAAGCAACTTAGAGAGACGACAATTCAGAAATACGGCAATCTGAGTGTAATGAATGTGCCTTTGGATGAAGCACAATTCATATCTATGCTTCTGAAAATCATGAATGCTAGCAAAACTTTAGAAATTGGAGTCTTCACTGGTTATTCTCTTCTTACTACAGCTCTTGCTCTTCCTCCTAACGGCAAGGTAATTGGAATTGATATGGATCGAGAAGCGTACAAGACGGGATTGCCCTTCATTCAGAAGGCAGAAGTCGAGCACAAAATTGATTTTATTCACACTGATGCATTATCAGGCCTCAACGGCCTTATTGATGGCAAACATGAAGAGTCGTTTGATTATGCGTTTGTGGATGCTGACAAGGAGAACTTCACAAAGTATCACGAGGTGTTACTGAAATTGGTAAGAAAGGGTGGAATAATTGCATATGACAATACATTATGGTCTGGTTCCGTGGCGATGTCTGAGGATGATGAAATGGACGATATCACAAAGCGAAAAAGAAAAGTTGCAATTGAATTCAACAACTATATTGCAAATGATACTCGCGTTGAGTCAACAATCCTTTCTATCGGGGATGGTGTAAGTCTCTGCCGAGTTCTGTAA 690 0.4 MAKNILKTPALLQYILETSSYPKEHEQLKQLRETTIQKYGNLSVMNVPLDEAQFISMLLKIMNASKTLEIGVFTGYSLLTTALALPPNGKVIGIDMDREAYKTGLPFIQKAEVEHKIDFIHTDALSGLNGLIDGKHEESFDYAFVDADKENFTKYHEVLLKLVRKGGIIAYDNTLWSGSVAMSEDDEMDDITKRKRKVAIEFNNYIANDTRVESTILSIGDGVSLCRVL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04889 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 228 IPR029063 -
Vivi5g04889 229 CDD AdoMet_MTases 68 171 - -
Vivi5g04889 229 Gene3D Vaccinia Virus protein VP39 1 228 IPR029063 -
Vivi5g04889 229 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 4 229 IPR002935 GO:0008171
Vivi5g04889 229 Pfam O-methyltransferase 17 227 IPR002935 GO:0008171
Vivi5g04889 229 PANTHER O-METHYLTRANSFERASE-RELATED 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04889 Vivi-Chr5 148424095 148426374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04889 3 229 Monolignol Biosynthesis Gene Families AT1G67990 55.947 4.73e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04889 K13272 K00588 gmx:100813350 347.821