Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04882 ATGGCGTCGTCCAAGGTTGTTGCGGTCTCAACCAATCCGGATCTGCCACGCGCCTCTCCTATATCATCGTCAACCTCTTCTTTTCATCTCTCTCATTCTTCTGAACCGCCTCCAAAAAAACCCACCACCATGGACGAAATTCTCAAGAACATTTACCCCGCCGCAATAAGAGCCGCCGAACAACAAGGAATACTAAAACAAGAACAACAAGAAGAATATCAAGAACATCAAGAACAACACCAACCGCATTTCCTCTTCAACAACACAATCGATGACGTCTTGAAGGATTTCGTCACCGACGATGGTGCCGGCACAACCTCTTATCATCCTGATCAATATCAATATCAAGATCCTTATCAACATCAATATCAATATCAATATCAAAACCCTTCTTCTGATGAAAGTTTCTCTACCTGTACCGGTGGTGGTGACAACACTCTAGAAGATTTCTTGATGAAAGCGGGTGCTCTTCCTTTCTCTAACCATAGTCAATATTCTTCTTCTTCCGAACCTTCACATTCTCTTGATGTTGCTGCTGGGGGAAAACGAAAGGCGGTTGAGGAAGCAGTTGACCTTGATAAAGCTGCTATTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCTGCTGCCAGGTCTAGAGAACGCAAACAGGCTTATACTAATGAGCTTGAGAGAGTTGTCAAGCAATTGGAGACAGAAAATAAGCTGCTAATAGAAGAAGAGGAAGAAAGGAAAAAGGAAAGGCTAAAGCAATTGAAAGAGTTGGTCCATCCAATTATGGGGCAGAGACAAAATCAGAGGCTGCGGAGATCAAATTCAATATAA 828 0.4263 MASSKVVAVSTNPDLPRASPISSSTSSFHLSHSSEPPPKKPTTMDEILKNIYPAAIRAAEQQGILKQEQQEEYQEHQEQHQPHFLFNNTIDDVLKDFVTDDGAGTTSYHPDQYQYQDPYQHQYQYQYQNPSSDESFSTCTGGGDNTLEDFLMKAGALPFSNHSQYSSSSEPSHSLDVAAGGKRKAVEEAVDLDKAAIQKQKRMIKNRESAARSRERKQAYTNELERVVKQLETENKLLIEEEEERKKERLKQLKELVHPIMGQRQNQRLRRSNSI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04882 275 CDD bZIP_plant_BZIP46 198 231 - -
Vivi5g04882 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 248 IPR004827 GO:0003700|GO:0006355
Vivi5g04882 275 PRINTS cAMP response element binding (CREB) protein signature 231 248 - -
Vivi5g04882 275 PRINTS cAMP response element binding (CREB) protein signature 211 231 - -
Vivi5g04882 275 PRINTS cAMP response element binding (CREB) protein signature 193 209 - -
Vivi5g04882 275 MobiDBLite consensus disorder prediction 1 44 - -
Vivi5g04882 275 Coils Coil 210 256 - -
Vivi5g04882 275 SMART brlzneu 194 258 IPR004827 GO:0003700|GO:0006355
Vivi5g04882 275 MobiDBLite consensus disorder prediction 1 38 - -
Vivi5g04882 275 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 253 IPR043452 GO:0003700|GO:0045893
Vivi5g04882 275 Coils Coil 59 79 - -
Vivi5g04882 275 Gene3D - 197 244 - -
Vivi5g04882 275 SUPERFAMILY Leucine zipper domain 198 250 IPR046347 GO:0003700|GO:0006355
Vivi5g04882 275 Pfam bZIP transcription factor 195 255 IPR004827 GO:0003700|GO:0006355
Vivi5g04882 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04882 Vivi-Chr5 148360538 148362771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04882 146 275 bZIP Transcription Factor Family AT5G44080 41.071 3.58e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi5g04882 bZIP_1 3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04882 K14432 - cam:101514708 100.523