Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04881 ATGGCGTCGTCCAAGGTTGTTGCGGTCTCAACCAATCCGGATCTGCCACGCGCCTCTCCTATATCATCGTCAACCTCTTCTTTTCATCTCTCTCATTCTTCTGAACCGCCTCCAAAAAAACCCACCACCATGGACGAAATTCTCAAGAACATTTACCCCGCCGCAATAAGAGCCGCCGAACAACAAGGAATACTAAAACAAGAACAACAAGAAGAATATCAAGAACATCAAGAACAACACCAACCGCATTTCCTCTTCAACAACACAATCGATGACGTCTTGAAGGATTTCGTCACCGACGATGGTGCCGGCACAACCTCTTATCATCCTGATCAATATCAATATCAAGATCCTTATCAACATCAATATCAATATCAATATCAAAACCCTTCTTCTGATGAAAGTTTCTCTACCTGTACCGGTGGTGGTGACAACACTCTAGAAGATTTCTTGATGAAAGCGGGTGCTCTTCCTTTCTCTAACCATAGTCAATATTCTTCTTCTTCCGAACCTTCACATTCTCTTGATGTTGCTGCTGGGGGAAAACGAAAGGCGGTTGAGGAAGCAGTTGACCTTGATAAAGCTGCTATTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCTGCTGCCAGGTCTAGAGAACGCAAACAGGCTTATACTAATGAGCTTGAGAGAGTTGTCAAGCAATTGGAGACAGAAAATAAGCTGCTAATAGAAGAAGAGAAAGGAAAAAGGAAAGGCTAA 747 0.4284 MASSKVVAVSTNPDLPRASPISSSTSSFHLSHSSEPPPKKPTTMDEILKNIYPAAIRAAEQQGILKQEQQEEYQEHQEQHQPHFLFNNTIDDVLKDFVTDDGAGTTSYHPDQYQYQDPYQHQYQYQYQNPSSDESFSTCTGGGDNTLEDFLMKAGALPFSNHSQYSSSSEPSHSLDVAAGGKRKAVEEAVDLDKAAIQKQKRMIKNRESAARSRERKQAYTNELERVVKQLETENKLLIEEEKGKRKG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04881 248 Gene3D - 197 247 - -
Vivi5g04881 248 SUPERFAMILY Leucine zipper domain 198 241 IPR046347 GO:0003700|GO:0006355
Vivi5g04881 248 MobiDBLite consensus disorder prediction 1 44 - -
Vivi5g04881 248 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 196 247 - -
Vivi5g04881 248 CDD bZIP_plant_BZIP46 198 238 - -
Vivi5g04881 248 MobiDBLite consensus disorder prediction 201 222 - -
Vivi5g04881 248 Pfam bZIP transcription factor 195 242 IPR004827 GO:0003700|GO:0006355
Vivi5g04881 248 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 241 IPR004827 GO:0003700|GO:0006355
Vivi5g04881 248 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 241 IPR043452 GO:0003700|GO:0045893
Vivi5g04881 248 SMART brlzneu 194 245 IPR004827 GO:0003700|GO:0006355
Vivi5g04881 248 PRINTS cAMP response element binding (CREB) protein signature 193 209 - -
Vivi5g04881 248 PRINTS cAMP response element binding (CREB) protein signature 211 231 - -
Vivi5g04881 248 PRINTS cAMP response element binding (CREB) protein signature 231 248 - -
Vivi5g04881 248 MobiDBLite consensus disorder prediction 1 38 - -
Vivi5g04881 248 Coils Coil 210 241 - -
Vivi5g04881 248 Coils Coil 59 79 - -
Vivi5g04881 248 MobiDBLite consensus disorder prediction 64 83 - -
Vivi5g04881 248 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04881 Vivi-Chr5 148360538 148362776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04881 146 247 bZIP Transcription Factor Family AT5G44080 43.066 1.52e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi5g04881 bZIP_1 5.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04881 K14432 - zju:107421564 105.145