Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04873 ATGGAGTGGATGATGCGAAAGACCAAGACCAAGACGAAGAAAAAGCCGCCTCGATTGGAGCGACTCAACGCCAAAAAAAACATCAATTACCAACTCCCCACCACCACCGCCGCCGCCGCCGCCATCCCGTCTCCATCTCCATCTCCATCTCCCTCCGATGAAGAAACCAGTCTCCGTGTATTAGGAATCGACGGCGAATTCGACCGCATCTTTCAGAGCTTGGGCCTTTCTGGTCCTGAGGATTTCTCTATCCCAACACAAGATTGGGAAGCTCGAAAGGTTCGCTCTTCCAACGTTGGTTCAATTTCAGTTTCTGAGGATTCTGCTGTTGTGATTGTTAGGGATTCGCCTTCTTCTTCAGGGGAACATAATGTTAGGGGTGTTGTTGATCCGCTCAGAAACGGTGAAAGGAGTGTGCTTTTTACCGATTCTGGTTCTTTCACTACTTCACATGATTATGATAGTGATGGTGGTGGGGAGAGAACGGTGTTTCCTTATGGGTGGCTTAAACCCACTTTTTCTTCGTGGCAAAAGGGTACCATTCTCGGAAAGGGTTCTTTTGGAACGGTTTATGAATGCCTCACCGACGATGGAAACTTTTATGCGGTGAAAGAGGTGTCTTTGTTGGATGATGGTCACCAGGGGAGACAAAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTAGGTTTCAACATGAGAACATAGTTCGATATTATGGCTCAGACAAGAATGAAAGCACACTGTATATATTCCTTGAGCTTGTGTCAAAAGGGTCATTGGCCAGTCTTTATCAAAGCTATCACCTAAATGATTCTCAAGTTTCTGCATACACAAGACAGATTTTATATGGCTTGAAGTATCTTCATGAAAATGATGTGGTCCACAGGGATATCAAGTGTTCTAATATACTGGTTGATGTAAATGGTTCGGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTAAATGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCTCCCGAGGTTGTTAACTTAAGAAACCAAGGTTACGGGCTAGCGGCTGATATATGGAGCTTAGGATGCACGGTTTTAGAGATGTTGACGAGGCAGCCACCTTACTCTGAATTAGAAGGAATGCAAGCAATATTTCGGATTGGTCGGGGTGAACTTCCACCGATTCCTGAATCTCTATCTAATGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAGTAAACGGCCTACTGCAGCTCAGCTATCAAATCATCCATTTCTAAGGAGACGATTAAGCGCAGGTTCTCCACGTGTTAATAGTATTGTTCAGCCATAA 1341 0.443 MEWMMRKTKTKTKKKPPRLERLNAKKNINYQLPTTTAAAAAIPSPSPSPSPSDEETSLRVLGIDGEFDRIFQSLGLSGPEDFSIPTQDWEARKVRSSNVGSISVSEDSAVVIVRDSPSSSGEHNVRGVVDPLRNGERSVLFTDSGSFTTSHDYDSDGGGERTVFPYGWLKPTFSSWQKGTILGKGSFGTVYECLTDDGNFYAVKEVSLLDDGHQGRQSIFQLQQEISLLSRFQHENIVRYYGSDKNESTLYIFLELVSKGSLASLYQSYHLNDSQVSAYTRQILYGLKYLHENDVVHRDIKCSNILVDVNGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNQGYGLAADIWSLGCTVLEMLTRQPPYSELEGMQAIFRIGRGELPPIPESLSNDARDFILKCLQVNPSKRPTAAQLSNHPFLRRRLSAGSPRVNSIVQP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04873 446 FunFam Mitogen-activated protein kinase 1, putative, expressed 174 441 - -
Vivi5g04873 446 MobiDBLite consensus disorder prediction 1 56 - -
Vivi5g04873 446 SMART serkin_6 176 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04873 446 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Vivi5g04873 446 Pfam Protein kinase domain 177 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04873 446 ProSiteProfiles Protein kinase domain profile. 176 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04873 446 SUPERFAMILY Protein kinase-like (PK-like) 160 435 IPR011009 -
Vivi5g04873 446 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 92 438 - -
Vivi5g04873 446 Gene3D Transferase(Phosphotransferase) domain 1 174 443 - -
Vivi5g04873 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Vivi5g04873 446 MobiDBLite consensus disorder prediction 27 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04873 Vivi-Chr5 148215634 148220649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04873 18 98 MAP Kinase Kinase Kinase AT4G08500 38.298 1.69e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi5g04873 Pkinase 1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04873 K13414 - gmx:100820552 586.645