Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04856 ATGTCATCAGTGAAAGGTTTCTACAAGCAGAAGAAAAACCCCAACACCGCCACAAAATCATCCAAATCCAAAAAGCCTCCGATCCGTGCCGCCACTTTCGGTTCCAATCTCGCCCAGCCACCAGCCCTCACATCCCGCAACGGCAAACCAGATCTCCAAGATGAATACAGCGAAAGCGAATCGGTATTGCGACAATTTGACATGAACATGGTTTACGGGCCTTGTATTGGGATGACGAGGCTGGCACGGTTGGAGCGTGCGGTGAATCTCGGTTTGAACCCTCCGCAGGAAATTGAGAGGCTTTTGAAAAGTGGTAAAGTTCAGCAGGAATCTCTCTGGGACACTCGCATTTAG 354 0.5 MSSVKGFYKQKKNPNTATKSSKSKKPPIRAATFGSNLAQPPALTSRNGKPDLQDEYSESESVLRQFDMNMVYGPCIGMTRLARLERAVNLGLNPPQEIERLLKSGKVQQESLWDTRI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04856 117 MobiDBLite consensus disorder prediction 1 58 - -
Vivi5g04856 117 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 3 115 IPR007218 GO:0000731|GO:0006260
Vivi5g04856 117 Pfam DNA polymerase delta, subunit 4 51 108 IPR007218 GO:0000731|GO:0006260
Vivi5g04856 117 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04856 Vivi-Chr5 147999492 148000166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04856 3 117 Core DNA Replication Machinery Family AT1G09815 55.462 6.39e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04856 K03505 - gmx:100778329 143.28