Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04847 ATGGAAACTAATCTTTTATTGAAGATAGATAATGATGATTTCCATCAAGAAGTTGAAAATCATGAACATGTTGAGAAAGAAGAAGTTCATGAAACTACAACTGGTGAAATAGAAGATGATGATGATGCTTCACTTTCTTTGCAAGATAACACAAAAATAAAAGAGTTAAGTGCTTTAGAAATGGAGATGGAAAATATGAAAGAAGAAAACAAAGCATTGAGGAAAGTGGTGGAACAAACAATGAAAGATTACTATGATCTGCAAACAAAATTTTCAGTCATCCAAGAAAAAAATAATAATAAAAGAAAGGATCATCATCAACTTTCTCTCTCATTACAAGACAATAATCCAACCACAAGTGGTGAAGGGCCATCTAGATTGATTCATGAGATGTTTAGTAAAAGCATTCAAAGAGCTTCATCTCCAATAATACTGAGCAATAGTGATGATAGTATAAGTGAGAGTGATTTGGGTTTATCACTAAGGTTGCAAACAAGGACTTGTGAGAAAGATATTGAAGAAAATAAAGAAGGGAAAAAAGAAGAATTGGCTGGTTTTGAATCAGTGCAGAATAAATTTCAGAGAGTGCATGAGTTGCCTGGTATTACTACTACTCATCCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGATGGGTGCCAATGGAGAAAATACGGACAAAAAATTGCTAAAGGAAATCCATGTCCACGAGCCTATTATCGTTGTACTGTAGTTCCAGGTTGCCCGGTTAGAAAACAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCAATGGCTTCAACAGCTTCAGCAGCAGCTTCATTTATGTTACTAGATTCAAGCAATCTCAATTCAGATTATGGTTACACATCTCAACAAACCTATAATCCTTACATTAACAATACCTTCCACCACCCATTAAACCCGTCTTCAAATATTAGAAGCATAAACCCCAATGATCCATCACAAGGGATTGTTCTTGATCTCACCAACAACAATAATCTCAACGAACCAGCGCGGCGTTTTTCTATGGCAGGTAGCTCAAGCTCCACCTCCATCGCAACCGATCAACCTCGTTTTCCTTGGTTGCAAAACAAATTTCAACAGAATAGTAGTACTAGTAGTGCTAATATTGGAATGAACACTTTTCAAAACCCTAGAGTACCATTGGATATTCATGATAGAATTTGGAAAGGATCAGAAGAAAGTAGTAATACTAATAACAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACAGTACTACTACTCATGGTAGCAACAATTAG 1434 0.3633 METNLLLKIDNDDFHQEVENHEHVEKEEVHETTTGEIEDDDDASLSLQDNTKIKELSALEMEMENMKEENKALRKVVEQTMKDYYDLQTKFSVIQEKNNNKRKDHHQLSLSLQDNNPTTSGEGPSRLIHEMFSKSIQRASSPIILSNSDDSISESDLGLSLRLQTRTCEKDIEENKEGKKEELAGFESVQNKFQRVHELPGITTTHPAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVVPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNLNSDYGYTSQQTYNPYINNTFHHPLNPSSNIRSINPNDPSQGIVLDLTNNNNLNEPARRFSMAGSSSSTSIATDQPRFPWLQNKFQQNSSTSSANIGMNTFQNPRVPLDIHDRIWKGSEESSNTNNNVSAIASDPKFRLAVAAAISSLMNKESNNSTTTHGSNN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04847 477 SUPERFAMILY WRKY DNA-binding domain 222 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g04847 477 SMART WRKY_cls 229 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g04847 477 Pfam WRKY DNA -binding domain 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g04847 477 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 469 IPR044810 GO:0003700
Vivi5g04847 477 FunFam probable WRKY transcription factor 31 214 291 - -
Vivi5g04847 477 MobiDBLite consensus disorder prediction 99 123 - -
Vivi5g04847 477 Gene3D WRKY domain 214 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g04847 477 Coils Coil 49 83 - -
Vivi5g04847 477 ProSiteProfiles WRKY domain profile. 224 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04847 Vivi-Chr5 147859268 147861793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04847 19 355 WRKY Transcription Factor Family AT1G68150 46.610 2.27e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi5g04847 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04847 - - gmx:100820209 527.709