Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04831 ATGCAATTACCCGAAAATTTGGAGAAGTTGTATTCTGAGGTTCATCTCCTTAAGTCACTGAAACAGGAAAATATTATCAAGTTGTATAGCTCTTGGGTGGACGAAAAGACAAGGACTATTAACATGATTACTGAGTTGTTTACTTCTGGGAGTTTGCGACAGTATAGGAAAAAACATAAGAATGTGGATATGAAAGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGCTTGTGCTTTCTGCACAGTCATAATCCTCCTGTTATTCACAGGGATCTTAAATGCGATAACATTTTTGTTAACGGGAACAATAGGCAAGTTAAGATTGGAGATCTCGGATTGGCAATTATCATGCAGCAGCCTACTGCCCGGAGTGTTATTGGTACTCCAGAATTCATGGCTCCTGAGCTTTATGAGGAAGAATATAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGTGAGTACCCGTATAGTGAATGCAAAAATCCGGCGCAGATATATAAGAAAGTTACCTCTGGTGTAAAGCCTGCTGCTCTTGCTAAAGTGAATGATCCTGAAGTGAAGCAATTTATAGAAAAGTGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAATTGCTGAAAGACCCATCATCAACATCAACAGCTATTGGTTAA 684 0.3947 MQLPENLEKLYSEVHLLKSLKQENIIKLYSSWVDEKTRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSHNPPVIHRDLKCDNIFVNGNNRQVKIGDLGLAIIMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGVKPAALAKVNDPEVKQFIEKCLVPASMRLPASELLKDPSSTSTAIG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04831 227 PIRSF ILK 2 215 - -
Vivi5g04831 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Vivi5g04831 227 SMART serkin_6 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04831 227 SUPERFAMILY Protein kinase-like (PK-like) 4 219 IPR011009 -
Vivi5g04831 227 Gene3D Phosphorylase Kinase; domain 1 2 45 - -
Vivi5g04831 227 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04831 227 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 219 - -
Vivi5g04831 227 Pfam Protein kinase domain 8 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04831 227 Gene3D Transferase(Phosphotransferase) domain 1 47 225 - -
Vivi5g04831 227 FunFam probable serine/threonine-protein kinase WNK9 47 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04831 Vivi-Chr5 147565254 147568491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04831 1 219 MAP Kinase Kinase Kinase AT5G41990 80.365 6.20e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi5g04831 Pkinase 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04831 K08867 - vvo:131607708 460.685