Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04824 ATGGATTCAACAGTCTCAGGATTGTTAACAAACATGCTAGACAGACTACTAACAACCGCTTTTCACAACATATCAATAGCAAAGGGTCTTCACACAGACATAACCAATCTCCAAAACACTCTCACCATCATCAATGCCTTCATTCTCGATGCTGAAAACAAGCAAACTCAAAGCAACTCAATTTCTACCTGGCTTCACCACCTCAAATACGTTTTACTAGACGCCCGTGATATTCTTGATGAGATTGAATATGAATCTTTGAGGAACCAAGTTCTCAAAGCAAACGGAACGTTTACTACAAAGGTACAACGTTTTCTCTCACCCTCTAGTAATCCTCTTGCATTTCGTATTAAGATGGCTCATAAGATTAAACATGTGAATGATAGGATAGATGAGGTTGCTTCTCTTAGGATGAAATTGGGTCTTATGGTATCAGAAAATCATCATGCAAGTGGTAGTGGAAGTGGAAATAGTAGTACTAGGGTAAGGAGAGAGACTCATTCTTATGTTAGATCTTCTCATGTGATTGGTAGAGATGAAGAGAAAGAAAAGGTTGTTAGTTTTTTGATGGCTCCGCCGTCAGGTAACCATGATCATGAGATTGATGTTATTCCTATTATTGGAATTGGAGGGTTGGGGAAAACAACTCTTGCTCAATTGGTTTATAATGATGATCGGGTGATTGAGTTTTTCGATCTGCGTATGTGGGTGTTTGTTTCAGATGTTTTTGATGTTAAGAGGTTGGTGTTGGACATTCTTAAAGCTATGCATGGAATGGAAATGGATGCTCACAAGTATAGTTTTGATCAATTGCAAAATTTGCTTCGCGAAAGGTTATGGGGGAAGAAGTTTTTACTTGTTCTAGATGATGTTTGGAATGAGGATTATAGAGAGTGGCTTGAGTTGAAAAAGCTTTTACTTGGGATGCATGATGATGAAGATGGTGAACTTGGTAATAAGATTATCGCGACCACTCGTAGTGACAGGGTTGCTTCGATTATGGGGAATGCTTATAAGCACAATTTGAAGTATCTTCCGGAAGAAGATTGTTTAAGGCTTTTTGTGAAGTGTGCATTTCCAGCAGGAGAGGAGAAACAGCATCCGAGGCTCGTGGAGATTGGGAAGGACATTGCGAGAAAGTGTAAAGGGTTGCCCCTGGCAGTGATAAGTTTAGGGTGTTTGCTTTATTCAAAACCTAATGAAAGTGAGTGGAAGAAAGTGAGAGATAGTGAGTTTTGGAAAGTGAACCCTCAAGATGATGATGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGTCATCTGGTTTGAAACAATGTTTCGCTTATTGTTCGGTTTTTCCTAAGGGTTATGAGTATACTAATATGGAGCTGATATCCTTTTGGATGGCCCATGGACTACTGCAACCGAAAAATGAAGATGAGGAACCGGAAGATCTCGGGGAGTTTTATATTCAAGAGCTAGTTTCAAGGTCTTTCTTTGAATGCGCTTCTGAAGAACAACTGGTTATTGACGGTCTTATTTCCGAAGAGCTTGAACTTCTAGGCATCTCCTTTTTCAAAATGCATGATCTTGTTCACGACCTTGCCGTGTTCACAATGCAAAATGAAAGGGCAGTAGTAAAATTTAGTTCAACAAGTATTAAAGAAAAAGTTCAGCATTTATCATTTGCAGACAGTGGTGGAGGAGTTCCTACATTTGGTAAAATATCGAGTAAGATCCGAACCATTGGATTCTGGCACGCGTGTCAAAAGGATCTTGCAATCACTGAACTGTTTTTCAAATGGGTCTCCAACAAGCAGTTTAAGTACCTCAGGGTGTTGAATATTCAAGGCTCTAATTTTCAGTTCTTGCCGGATTGTTTCAACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCAGAGGTTGGAAAAACTCCCAGATTCCATTTGCATGCTCCAAAGTCTAGAGGTATTAAATCTCTGGAGATGTGTAGCACTTGCATATATTCCCCCAAAATTGAGGAATCTTGTCAGCCTTAGGATTTTGTGGATTACAACACAAGTCACTGATTTGTCTTTCATAGGTATTGGAAACTTGAAATATCTACAAATTTTAATTTTGTGGAATTGCGATAATTTGGTCTTCCTTCCACGCGATTTGAGGCATCTGACTGCTTTAAAGAGATTGACGATCGAGGCTTGCATAGAGGTGATAAGTTTCGAGGATGAAGGAGAAGAAGACGAAAATGAAAACTACACCTTGAAACTTGAGCGGTTTTCAATAGACAAATTACCCAATTTGGCAGTATTACCTGGTTGGCTTAGAAGATGTGATAAAACTTTGAGGTACATGGGCCTTTCAGAGTGTTCGAGTCTAATGGCATTGCCAGAATGGTTGGTAAATCTAACATCACTCGAGACGCTTCTAATTGCTGACTGTCGGAATTTGACATTACCGGAACATATGGATCGTCTTCAAAACCTTCAGAATTTGAAGATATATGGATGTCCTCAGCTAGTTGAGAGATGCAAACAAACTACAGGCTCTGACTGGTACAAGATAGCTCATATTCCAAATGTTGAACTTGGAAGCGATTAG 2592 0.3935 MDSTVSGLLTNMLDRLLTTAFHNISIAKGLHTDITNLQNTLTIINAFILDAENKQTQSNSISTWLHHLKYVLLDARDILDEIEYESLRNQVLKANGTFTTKVQRFLSPSSNPLAFRIKMAHKIKHVNDRIDEVASLRMKLGLMVSENHHASGSGSGNSSTRVRRETHSYVRSSHVIGRDEEKEKVVSFLMAPPSGNHDHEIDVIPIIGIGGLGKTTLAQLVYNDDRVIEFFDLRMWVFVSDVFDVKRLVLDILKAMHGMEMDAHKYSFDQLQNLLRERLWGKKFLLVLDDVWNEDYREWLELKKLLLGMHDDEDGELGNKIIATTRSDRVASIMGNAYKHNLKYLPEEDCLRLFVKCAFPAGEEKQHPRLVEIGKDIARKCKGLPLAVISLGCLLYSKPNESEWKKVRDSEFWKVNPQDDDGILAALKLSYNHLSSGLKQCFAYCSVFPKGYEYTNMELISFWMAHGLLQPKNEDEEPEDLGEFYIQELVSRSFFECASEEQLVIDGLISEELELLGISFFKMHDLVHDLAVFTMQNERAVVKFSSTSIKEKVQHLSFADSGGGVPTFGKISSKIRTIGFWHACQKDLAITELFFKWVSNKQFKYLRVLNIQGSNFQFLPDCFNKMKHLRYLDLSYCQRLEKLPDSICMLQSLEVLNLWRCVALAYIPPKLRNLVSLRILWITTQVTDLSFIGIGNLKYLQILILWNCDNLVFLPRDLRHLTALKRLTIEACIEVISFEDEGEEDENENYTLKLERFSIDKLPNLAVLPGWLRRCDKTLRYMGLSECSSLMALPEWLVNLTSLETLLIADCRNLTLPEHMDRLQNLQNLKIYGCPQLVERCKQTTGSDWYKIAHIPNVELGSD 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04824 863 Gene3D - 159 340 IPR027417 -
Vivi5g04824 863 Gene3D - 9 124 - -
Vivi5g04824 863 Gene3D Ribonuclease Inhibitor 751 847 IPR032675 -
Vivi5g04824 863 Gene3D - 425 532 IPR036388 -
Vivi5g04824 863 Pfam Rx N-terminal domain 9 98 IPR041118 -
Vivi5g04824 863 PRINTS Disease resistance protein signature 203 218 - -
Vivi5g04824 863 PRINTS Disease resistance protein signature 381 395 - -
Vivi5g04824 863 PRINTS Disease resistance protein signature 278 292 - -
Vivi5g04824 863 PRINTS Disease resistance protein signature 624 640 - -
Vivi5g04824 863 SUPERFAMILY L domain-like 522 850 - -
Vivi5g04824 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 445 IPR027417 -
Vivi5g04824 863 Gene3D Ribonuclease Inhibitor 586 738 IPR032675 -
Vivi5g04824 863 PANTHER DISEASE RESISTANCE PROTEIN RP 69 755 IPR044974 GO:0006952
Vivi5g04824 863 Pfam NB-ARC domain 180 432 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04824 Vivi-Chr5 147488583 147492992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04824 200 837 WRKY Transcription Factor Family AT5G45050 23.099 1.31e-11 66.6