Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04823 ATGAAATTGGGTCTTATGGTATCAGAAAATCATCATGCAAGTGGTAGTGGAAGTGGAAATAGTAGTACTAGGGTAAGGAGAGAGACTCATTCTTATGTTAGATCTTCTCATGTGATTGGTAGAGATGAAGAGAAAGAAAAGGTTGTTAGTTTTTTGATGGCTCCGCCGTCAGGTAACCATGATCATGAGATTGATGTTATTCCTATTATTGGAATTGGAGGGTTGGGGAAAACAACTCTTGCTCAATTGGTTTATAATGATGATCGGGTGATTGAGTTTTTCGATCTGCGTATGTGGGTGTTTGTTTCAGATGTTTTTGATGTTAAGAGGTTGGTGTTGGACATTCTTAAAGCTATGCATGGAATGGAAATGGATGCTCACAAGTATAGTTTTGATCAATTGCAAAATTTGCTTCGCGAAAGGTTATGGGGGAAGAAGTTTTTACTTGTTCTAGATGATGTTTGGAATGAGGATTATAGAGAGTGGCTTGAGTTGAAAAAGCTTTTACTTGGGATGCATGATGATGAAGATGGTGAACTTGGTAATAAGATTATCGCGACCACTCGTAGTGACAGGGTTGCTTCGATTATGGGGAATGCTTATAAGCACAATTTGAAGTATCTTCCGGAAGAAGATTGTTTAAGGCTTTTTGTGAAGTGTGCATTTCCAGCAGGAGAGGAGAAACAGCATCCGAGGCTCGTGGAGATTGGGAAGGACATTGCGAGAAAGTGTAAAGGGTTGCCCCTGGCAGTGATAAGTTTAGGGTGTTTGCTTTATTCAAAACCTAATGAAAGTGAGTGGAAGAAAGTGAGAGATAGTGAGTTTTGGAAAGTGAACCCTCAAGATGATGATGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGTCATCTGGTTTGAAACAATGTTTCGCTTATTGTTCGGTTTTTCCTAAGGGTTATGAGTATACTAATATGGAGCTGATATCCTTTTGGATGGCCCATGGACTACTGCAACCGAAAAATGAAGATGAGGAACCGGAAGATCTCGGGGAGTTTTATATTCAAGAGCTAGTTTCAAGGTCTTTCTTTGAATGCGCTTCTGAAGAACAACTGGTTATTGACGGTCTTATTTCCGAAGAGCTTGAACTTCTAGGCATCTCCTTTTTCAAAATGCATGATCTTGTTCACGACCTTGCCGTGTTCACAATGCAAAATGAAAGGGCAGTAGTAAAATTTAGTTCAACAAGTATTAAAGAAAAAGTTCAGCATTTATCATTTGCAGACAGTGGTGGAGGAGTTCCTACATTTGGTAAAATATCGAGTAAGATCCGAACCATTGGATTCTGGCACGCGTGTCAAAAGGATCTTGCAATCACTGAACTGTTTTTCAAATGGGTCTCCAACAAGCAGTTTAAGTACCTCAGGGTGTTGAATATTCAAGGCTCTAATTTTCAGTTCTTGCCGGATTGTTTCAACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCAGAGGTTGGAAAAACTCCCAGATTCCATTTGCATGCTCCAAAGTCTAGAGGTATTAAATCTCTGGAGATGTGTAGCACTTGCATATATTCCCCCAAAATTGAGGAATCTTGTCAGCCTTAGGATTTTGTGGATTACAACACAAGTCACTGATTTGTCTTTCATAGGTATTGGAAACTTGAAATATCTACAAATTTTAATTTTGTGGAATTGCGATAATTTGGTCTTCCTTCCACGCGATTTGAGGCATCTGACTGCTTTAAAGAGATTGACGATCGAGGCTTGCATAGAGGTGATAAGTTTCGAGGATGAAGGAGAAGAAGACGAAAATGAAAACTACACCTTGAAACTTGAGCGGTTTTCAATAGACAAATTACCCAATTTGGCAGTATTACCTGGTTGGCTTAGAAGATGTGATAAAACTTTGAGGTACATGGGCCTTTCAGAGTGTTCGAGTCTAATGGCATTGCCAGAATGGTTGGTAAATCTAACATCACTCGAGACGCTTCTAATTGCTGACTGTCGGAATTTGACATTACCGGAACATATGGATCGTCTTCAAAACCTTCAGAATTTGAAGATATATGGATGTCCTCAGCTAGTTGAGAGATGCAAACAAACTACAGGCTCTGACTGGTACAAGATAGCTCATATTCCAAATGTTGAACTTGGAAGCGATTAG 2181 0.3943 MKLGLMVSENHHASGSGSGNSSTRVRRETHSYVRSSHVIGRDEEKEKVVSFLMAPPSGNHDHEIDVIPIIGIGGLGKTTLAQLVYNDDRVIEFFDLRMWVFVSDVFDVKRLVLDILKAMHGMEMDAHKYSFDQLQNLLRERLWGKKFLLVLDDVWNEDYREWLELKKLLLGMHDDEDGELGNKIIATTRSDRVASIMGNAYKHNLKYLPEEDCLRLFVKCAFPAGEEKQHPRLVEIGKDIARKCKGLPLAVISLGCLLYSKPNESEWKKVRDSEFWKVNPQDDDGILAALKLSYNHLSSGLKQCFAYCSVFPKGYEYTNMELISFWMAHGLLQPKNEDEEPEDLGEFYIQELVSRSFFECASEEQLVIDGLISEELELLGISFFKMHDLVHDLAVFTMQNERAVVKFSSTSIKEKVQHLSFADSGGGVPTFGKISSKIRTIGFWHACQKDLAITELFFKWVSNKQFKYLRVLNIQGSNFQFLPDCFNKMKHLRYLDLSYCQRLEKLPDSICMLQSLEVLNLWRCVALAYIPPKLRNLVSLRILWITTQVTDLSFIGIGNLKYLQILILWNCDNLVFLPRDLRHLTALKRLTIEACIEVISFEDEGEEDENENYTLKLERFSIDKLPNLAVLPGWLRRCDKTLRYMGLSECSSLMALPEWLVNLTSLETLLIADCRNLTLPEHMDRLQNLQNLKIYGCPQLVERCKQTTGSDWYKIAHIPNVELGSD 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04823 726 Gene3D Ribonuclease Inhibitor 449 601 IPR032675 -
Vivi5g04823 726 Gene3D Ribonuclease Inhibitor 614 710 IPR032675 -
Vivi5g04823 726 PANTHER DISEASE RESISTANCE PROTEIN RP 40 619 IPR044974 GO:0006952
Vivi5g04823 726 MobiDBLite consensus disorder prediction 1 27 - -
Vivi5g04823 726 MobiDBLite consensus disorder prediction 11 26 - -
Vivi5g04823 726 Gene3D - 288 395 IPR036388 -
Vivi5g04823 726 SUPERFAMILY L domain-like 385 713 - -
Vivi5g04823 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 308 IPR027417 -
Vivi5g04823 726 PRINTS Disease resistance protein signature 244 258 - -
Vivi5g04823 726 PRINTS Disease resistance protein signature 487 503 - -
Vivi5g04823 726 PRINTS Disease resistance protein signature 66 81 - -
Vivi5g04823 726 PRINTS Disease resistance protein signature 141 155 - -
Vivi5g04823 726 Pfam NB-ARC domain 43 295 IPR002182 GO:0043531
Vivi5g04823 726 Gene3D - 22 203 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04823 Vivi-Chr5 147488284 147492666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04823 63 700 WRKY Transcription Factor Family AT5G45050 23.099 9.02e-12 67.0