Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04813 ATGGGTTTCACATTCAGCACCATGACTCTGAATCTCCTTCTCTTAATAGCAATGGTAGCCACCAACATTCTCTCCCTCTACCACCTCTCCACAACCCTCCAATCTCCCAAATCCTCCCCAAAACCACTCCCACAAATCCCCGACGAACTCCTCCGTCAACTCCACACCATACGCGCCACCATCAACCACCTCACGCGCCTCCAAGACACCAACCCCAATCCCAGCACCAAATCCTCAATCCCTTCAGATCTATTACTCTACTCCCACCTCTCTCCAATTGCTTCATCCTGCCACAATCACCCTGATCTTCTTCACAAGTACATGACCTACACACCGTTCTCTCTTTGCCCCTCCGATTCCGAACTCGCTGAATCGCTAATTCTTCGCGGTTGTCACCCTCTCCCTCGCCGCCGTTGCTTCTCTCCGACGCCGAAGAAGCAAACTCCGTCGAGCTCGTTTCCTCATAACCCTTTCCCATCTTCCCTCCCTGATTCATCCGTCATTTGGGATCGTTACTCATGCAAATCCTTCGATTGTCTCAACCGTCAAAACCCTAATCTCGGATTCCAACCCTCTCGTGAAACTTCCAAGTTTACTTCCTACACTTCCGACTTGGATCTACCTGTTCAACAGCTTATCCAGATCGCGAAATCGGCGAAATCGGTTCTCCGTCTTGGCCTCGACGTCGGCGGAGGTACAGGATCGTTCGCGGCAGCGATGAAGCTCCGGAATGTTACTGTGGTGACAACTACCATGAATGTTGTGGCGCCTTACAGTGAGGCTGTTGCGTTGAGGGGACTTGTGCCACTTCATGTGCCGTTGCAGCAGAGGCTGCCGATTTTCGATGGTGTTGTGGATATTGTTCGGTGTGGGCGTGCGGTGAATAGGTGGATTCCGGTGACGATGTTGGAGTTTTTGTTGTTTGATGTTGATAGAGTGTTGAGAGGTGGAGGGTATTTGTGGTTGGATCATTTTTTCAGTAAGGGTGTGGATCTTGAGAAAGTTTATGCGCCTTTGATTGGGAAATTGGGGTACAAGAAGGTGAAGTGGGCGACGGGGAATAAGACGGATGCCGGTGGTGTCAAGAATGGGGAGGTTTACTTGACTGTGTTGCTGCAGAAGCCTCTCTCAAGATGA 1137 0.5075 MGFTFSTMTLNLLLLIAMVATNILSLYHLSTTLQSPKSSPKPLPQIPDELLRQLHTIRATINHLTRLQDTNPNPSTKSSIPSDLLLYSHLSPIASSCHNHPDLLHKYMTYTPFSLCPSDSELAESLILRGCHPLPRRRCFSPTPKKQTPSSSFPHNPFPSSLPDSSVIWDRYSCKSFDCLNRQNPNLGFQPSRETSKFTSYTSDLDLPVQQLIQIAKSAKSVLRLGLDVGGGTGSFAAAMKLRNVTVVTTTMNVVAPYSEAVALRGLVPLHVPLQQRLPIFDGVVDIVRCGRAVNRWIPVTMLEFLLFDVDRVLRGGGYLWLDHFFSKGVDLEKVYAPLIGKLGYKKVKWATGNKTDAGGVKNGEVYLTVLLQKPLSR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04813 378 MobiDBLite consensus disorder prediction 139 158 - -
Vivi5g04813 378 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 208 321 IPR004159 GO:0008168
Vivi5g04813 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 227 350 IPR029063 -
Vivi5g04813 378 MobiDBLite consensus disorder prediction 143 158 - -
Vivi5g04813 378 Gene3D Vaccinia Virus protein VP39 194 339 IPR029063 -
Vivi5g04813 378 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 8 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04813 Vivi-Chr5 147401300 147404744 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04813 - - cam:101498967 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04813 5 147401300 147404744 Vivi5g04813 5 147401300 147404744 ECH
Vivi5g04813 5 147401300 147404744 Vivi5g05223 5 153664215 153664810 PCT