Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04811 ATGGAGAAAGAGCCACTTCTTCCATATTTCAGCCCCAGAAAAAGGCTCACCCCATTGCCTCCTCATCTTTTCCCTTTACCAGAGAACGATGAAGTTGTTCTTCCTGTTACCCCTTCTGAGTTCAAAGATCGTCTCATCTTTGGACCTTCATGTGCTTCACCAAGAGACTCTTCACCTTTGGCGGATGCCTTAACACTTTCACGAAATTCTCCGAGAACTCCTTCCACTTGTTCCTCTTCACACGAGTTTGCATCAGCAACATCCACGCTTTGTGATTCATCATCTCAACAACAGCAATTATCTTCTTGGCTCATTGACCCTAATTATCCATGGCGGAAAACCAATTTGCATCGCTCCAAAACTGCACCGGCTATGGCGGTTATTAGTGATTTCAATCATCCGACTGTGAAAAGACCACAATTTGGTAGCCAATCTATTGTTCATCAAGCTTTTATTCTTCTTGTTCTTTATTTGGCTTTAGGGGTTGTTATTTACTGGTTCAATCGTCATAGTTTTACAGCGACCGAGACTCATCCTATTGTAGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATTGGATACGGTGACATTACTCCTAATAGTACTGCAACCAAGATTTTCTCTATATTGTTTGTGTTAATCGGTTTTGGTTTTATTGATATATTGCTTAGTGGAATGGTTAGTTATGTTCTTGATTTGCAAGAGAATCATTTGTTGAGGGCAGTGAAGGGAAGGGGTGCGACTGCGAAGGATGGGAGGTCGTACATAGTTGATGTGAAGAAAGGTAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTACTTTGTATTGGAGTTGGTGTCGTGGTTATGCATTTTGTGGAAAGTCTTGGGTGGGTAGATTCCTTTTATCTTTCGGTTATGTCTGTTACGACGGTTGGGTATGGCGATCATGCTTTCAAGACTATGCACGGTCGTATCTTTGCTGCAATTTGGTTGCTCGTGTCAACACTTGCAGTTGCTCGAGCTTTCCTTTATTTGGCTGAGGCGAGAGTGGATAAGCGACATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGACATGACTGTTGCTGAGTTTCTTGCTGCTGACATAGACAACAATGGATTTGTGAGTAAATCAGAATATGTTATATACAAGCTGAAGGAGATGGGAAAAGTGACAGAGAAGGACATCATGCAGATCAGTCAGAAATTTGATAGACTAGATACTGGCAACATTGGAAAAATAACACTCGGTGATCTCATGGAGGGTCATAATGGATGA 1302 0.4217 MEKEPLLPYFSPRKRLTPLPPHLFPLPENDEVVLPVTPSEFKDRLIFGPSCASPRDSSPLADALTLSRNSPRTPSTCSSSHEFASATSTLCDSSSQQQQLSSWLIDPNYPWRKTNLHRSKTAPAMAVISDFNHPTVKRPQFGSQSIVHQAFILLVLYLALGVVIYWFNRHSFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKIFSILFVLIGFGFIDILLSGMVSYVLDLQENHLLRAVKGRGATAKDGRSYIVDVKKGRMRIRMKVALALGVVVLCIGVGVVVMHFVESLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISQKFDRLDTGNIGKITLGDLMEGHNG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04811 433 Pfam Ion channel 278 347 IPR013099 -
Vivi5g04811 433 Pfam Ion channel 152 232 IPR013099 -
Vivi5g04811 433 PRINTS Two pore domain K+ channel signature 189 217 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi5g04811 433 PRINTS Two pore domain K+ channel signature 310 319 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi5g04811 433 Gene3D - 257 367 - -
Vivi5g04811 433 Gene3D - 132 251 - -
Vivi5g04811 433 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 152 406 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi5g04811 433 SUPERFAMILY Voltage-gated potassium channels 149 267 - -
Vivi5g04811 433 FunFam Two-pore potassium channel 5 135 245 - -
Vivi5g04811 433 FunFam Two-pore potassium channel 3 255 369 - -
Vivi5g04811 433 SUPERFAMILY Voltage-gated potassium channels 263 369 - -
Vivi5g04811 433 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Vivi5g04811 433 MobiDBLite consensus disorder prediction 53 80 - -
Vivi5g04811 433 SUPERFAMILY EF-hand 367 429 IPR011992 -
Vivi5g04811 433 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04811 Vivi-Chr5 147336692 147342827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04811 4 433 Ion Channels AT4G18160 63.134 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04811 K05389 - gmx:100787238 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04811 5 147336692 147342827 Vivi5g04811 5 147336692 147342827 ECH