Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04806 ATGTCTGATGAACCTAGACAACCCTACTTCCAAAACTTCATGCTAGATCATCAGACAACAGATCAAGATCAAGGATCTAACAACATGTACTGTGAAAAACAGTTATCTACCTTTCCTAATTTATATGACTCTTCATCTTCACAACCTAATTGCTTTGATCCATCATCTTTTAACATGAGTTTCACAGAATGTTTACAAGGAGGTAACATGGATCACTATAATTCACCACTTGCAAACTCTTTTGGAGTACTGTCTCCTTCTTCATCAGAGGTTTTTTCATCTGTTGATCAAGGAAATCAACAAAAACCAGAACTAGGTCCTGATCAAACCCTTGCTAACTCTTCTGTCTCTAACTCCTCATCTTCTGAAGCTGGTGTAGCAGAAGAAGATTCAGCAAAAAGAAAGAAAAATGGACAAGTTGTTAAAGAAGAACAAGGACAAGAAACCACTAAAAATGGGAACAACAAGATGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTAGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCTGTTAAGAATAGTCCATACCCTAGGAGCTATTATAGGTGTACAACACAGAAGTGTACAGTGAAAAAACGCGTAGAAAGATCATACGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCTCTACGAGGCAATGCGGCTGCAATGTTCACACCTTCTTTGCTATCTGCACCTACCCCTTTTTCATATGGATCAAACTTCCCTCAAGATTTTCTTCTCCATATGCACCACCATCATAACAACACCACCTTCAATATCAGTTCTCAACCAAGTAGTACTAATTCTGCTTCTGTTGCTGGTTCTATTTACTCTCACAACAACAATGTTAGCAACTCTCTTCTTCATCAATATCAACAACAGCTTGTTCCTGATCAATATGGATTGCTTCAAGATATTGTCCCTTCCATGTTCCTCAATACAACCAACCATAACTGA 1044 0.3822 MSDEPRQPYFQNFMLDHQTTDQDQGSNNMYCEKQLSTFPNLYDSSSSQPNCFDPSSFNMSFTECLQGGNMDHYNSPLANSFGVLSPSSSEVFSSVDQGNQQKPELGPDQTLANSSVSNSSSSEAGVAEEDSAKRKKNGQVVKEEQGQETTKNGNNKMDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSLLSAPTPFSYGSNFPQDFLLHMHHHHNNTTFNISSQPSSTNSASVAGSIYSHNNNVSNSLLHQYQQQLVPDQYGLLQDIVPSMFLNTTNHN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04806 347 MobiDBLite consensus disorder prediction 86 126 - -
Vivi5g04806 347 Pfam WRKY DNA -binding domain 183 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g04806 347 SMART WRKY_cls 182 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g04806 347 MobiDBLite consensus disorder prediction 153 171 - -
Vivi5g04806 347 FunFam WRKY transcription factor 57 168 242 - -
Vivi5g04806 347 ProSiteProfiles WRKY domain profile. 177 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g04806 347 SUPERFAMILY WRKY DNA-binding domain 174 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g04806 347 Gene3D WRKY domain 166 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g04806 347 MobiDBLite consensus disorder prediction 86 171 - -
Vivi5g04806 347 MobiDBLite consensus disorder prediction 127 142 - -
Vivi5g04806 347 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 289 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04806 Vivi-Chr5 147258787 147260611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04806 39 341 WRKY Transcription Factor Family AT4G18170 45.794 1.06e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi5g04806 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04806 - - cam:101497541 371.703