Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04796 ATGGCCGCATCATCATCATCCATGGCTCTCTCTTCTCCAACCTTGGCTGGCAAGCAACTCAAGCTGACCCCCTCAAGCCAAGAATTGGGAGCTGCAAGGTTCACCATGAGGAAGTCTGCTAACACCAAGAAAGTAGCTTCCTCTGGCAGCCCATGGTACGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCCTCCTACTTGACTGGAGAATTCCCAGGTGACTACGGTTGGGACACTGCCGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCGTGAGCTTGAAGTCATCCACTCCAGATGGGCTATGTTGGGAGCTTTGGGATGTGTCTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAAGCTGTATGGTTTAAAGCCGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGTTTGGTCCATGCTCAAAGCATCCTTGCCATATGGGCCACTCAAGTTATCTTGATGGGAGCTGTTGAAGGTTACCGTATTGCCGGTGGCCCTCTTGGTGAGGTTGTTGACCCACTTTACCCAGGTGGCAGCTTTGATCCATTGGGCTTAGCTGACGACCCAGAGGCATTTGCAGAATTGAAGGTGAAGGAACTCAAGAATGGTAGATTAGCTATGTTCTCAATGTTTGGATTCTTTGTTCAAGCAATTGTAACTGGAAAGGGTCCTTTGGAGAACCTTGCCGATCATCTTGCAGATCCAGTCAACAACAATGCATGGTCATATGCCACCAACTTTGTTCCTGGAAAGTGA 807 0.4957 MAASSSSMALSSPTLAGKQLKLTPSSQELGAARFTMRKSANTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04796 268 Gene3D Chlorophyll a/b binding protein domain 59 261 - -
Vivi5g04796 268 FunFam Chlorophyll a-b binding protein, chloroplastic 59 261 - -
Vivi5g04796 268 SUPERFAMILY Chlorophyll a-b binding protein 51 265 - -
Vivi5g04796 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 268 IPR001344 GO:0009765|GO:0016020
Vivi5g04796 268 Pfam Chlorophyll A-B binding protein 69 234 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04796 Vivi-Chr5 147059537 147060570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04796 4 268 Chloroplast and Mitochondria Gene Families AT1G29930 86.142 7.69e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04796 K08912 - jre:108990271 493.426