Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04795 ATGGATGTAGACTACAGAGATATTGATTGTGAAGAATTAGCTAATTGTAATAATGTCGGTGATGAAGAAGGAAAAGAGGACATGGATACTTACAAAAAGATTAATGACCTGACAGATGATGATATAAGAGGTTTGGAATTTTCTTCTCAGGAAAAAGCAATAAATTTCTATGAAATATATGCCAAAAGTCACGGGTTTGCAATAAGAAAAGATGATGTAAAACGTAATTATGAAGGGAATATAATTGTTCGTCAATTAGTTTGTAATAGAGAAGGTAAAAGTGATAAGAAGAGGGGACGATGTAGAGATCCAAGACCTACCACGCGAATGGAATGTCGTGCTAGGTTTCGAGTAGCTCTAAATCTTGTGACTGAAAAATGGAGAGTTTCCGTATTTGAGCCCTCTCATAACCATGAGTTAACTCCATCACACTATGTTCATTTGATTCCTAAGTATCGTCGATTGACTGAATCGGATAAAACTCTTGTTGATGGCTTGCACACACATGGTGTTAGAACATGCCATATTTTAGGTTTTATGATGGCTCAAAAAGGTGGTCATAAAGGTCTTGGATTTTGTAAAAAGGACTTATATAACTACTTAAATAATGAAGCAATGGCAAGAATAGAAGGAGGGGATGCTTTTGCTGCTTTGAGTTATTTATAG 666 0.3544 MDVDYRDIDCEELANCNNVGDEEGKEDMDTYKKINDLTDDDIRGLEFSSQEKAINFYEIYAKSHGFAIRKDDVKRNYEGNIIVRQLVCNREGKSDKKRGRCRDPRPTTRMECRARFRVALNLVTEKWRVSVFEPSHNHELTPSHYVHLIPKYRRLTESDKTLVDGLHTHGVRTCHILGFMMAQKGGHKGLGFCKKDLYNYLNNEAMARIEGGDAFAALSYL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04795 221 Pfam FAR1 DNA-binding domain 55 141 IPR004330 -
Vivi5g04795 221 PANTHER OS01G0519700 PROTEIN 42 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04795 Vivi-Chr5 147054871 147055536 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g04795 FAR1 2.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04795 - - vvo:131605688 463.381