Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04793 ATGGCCGCATCATCCATGGCTCTCTCTTCACCAACCTTGACTGGCAAGCCAGTCAAGCTGACCCCATCAAGCCAAGAATTGGGAGCTGCAAGGTTCACCATGAGGAAGTCTGCCAACACCAAGAAAGTAGCTTCCTCTGGCAGCCCATGGTACGGCCCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGCCCCCGTCCTACTTGACTGGAGAGTTCCCAGGTGACTACGGTTGGGACACTGCCGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCGTGAGCTTGAAGTCATCCACTCCAGATGGGCTATGTTGGGAGCTTTGGGATGTGTCTTCCCAGAGCTTTTGTCTCGCAACGGTGTTAAATTCGGTGAAGCAGTTTGGTTCAAGGCTGGTTCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGTAACCCAAGCTTGGTTCATGCTCAAAGCATCCTTGCCATCTGGGCCACTCAAGTTATCTTGATGGGAGCTGTTGAAGGTTACCGTATTGCCGGTGGCCCTCTCGGTGAGGTGGTTGACCCACTTTACCCAGGAGGCAGCTTTGATCCATTGGGCTTAGCTGACGACCCAGAAGCATTCGCAGAATTGAAGGTGAAGGAGCTTAAGAACGGTAGATTAGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTGACCGGAAAGGGTCCTTTGGAGAACCTTGCCGATCATCTTTCCGACCCAGTTAACAACAACGCCTGGTCATATGCCACCAACTTTGTTCCCGGAAAGTGA 801 0.5119 MAASSMALSSPTLTGKPVKLTPSSQELGAARFTMRKSANTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04793 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 266 IPR001344 GO:0009765|GO:0016020
Vivi5g04793 266 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g04793 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Vivi5g04793 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Vivi5g04793 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Vivi5g04793 266 FunFam Chlorophyll a-b binding protein, chloroplastic 57 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04793 Vivi-Chr5 147038811 147039712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04793 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 87.313 6.01e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04793 K08912 - jre:108990271 499.975