Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04782 ATGCAGACTCACGAGTATTTTCATCGGGGAAAAGTGGTACTTCCTATGGCAGACGAAGCCATTGGTACTTATATGAATGCTCCACATACTTCTGCATTTGGTGCAGTTTTACCTCCAGGTGCAAGGCAGATAACACCTTTTGAAAGGTTTAACTTGCATCCCTCTGAGGTTTGCCCCGAGAATTTCATTGTCTTTGATCAAACAGATCAACAAAACAGGGTTTTGTTCAACCCTGCGACGACCTACAAGTTTAACAGTCCTGGCTTCAACTTCAACACTCATGCATATACTCAGGATTTTGAAAAAGACAAAATTAATCAAATGGAAAGGGAATTGTCATCTTCTTTTGAAGAGGATTCTAAGGACATTGATGCATTGATGAGCCTAGACTCGGATGAGCTAGAGGACTATGATGAAGAAGAAGTTAGCACAGCAAGAACTCACGAAAAGGATGAGAGTACAACTGATACTTGCTCTAGCTATTACACGAAATCAAGGAAGAAGAGGTTATTATCATCTTCTGTACAAAACTCTTCCCGTACCAAAGGTTACTGCAGCAGCAGTGAAAAGAAACAACACCAGGAGATGAAGAGGATGGTGAAAATATTGAAAAATATCGTGCCTGGCGGAGGTAACCAAATGGATACCGTCACTGTTTTGGACGAAGCTGTAAAGTACCTCAAGTCTCTCAAGGTTGAAGTGGAGCAATTCGGAGTTGGAGAATGA 726 0.4146 MQTHEYFHRGKVVLPMADEAIGTYMNAPHTSAFGAVLPPGARQITPFERFNLHPSEVCPENFIVFDQTDQQNRVLFNPATTYKFNSPGFNFNTHAYTQDFEKDKINQMERELSSSFEEDSKDIDALMSLDSDELEDYDEEEVSTARTHEKDESTTDTCSSYYTKSRKKRLLSSSVQNSSRTKGYCSSSEKKQHQEMKRMVKILKNIVPGGGNQMDTVTVLDEAVKYLKSLKVEVEQFGVGE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04782 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 236 IPR036638 GO:0046983
Vivi5g04782 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 230 IPR011598 GO:0046983
Vivi5g04782 241 MobiDBLite consensus disorder prediction 141 155 - -
Vivi5g04782 241 MobiDBLite consensus disorder prediction 129 191 - -
Vivi5g04782 241 PANTHER TRANSCRIPTION FACTOR BHLH145 26 240 IPR037546 -
Vivi5g04782 241 SMART finulus 186 236 IPR011598 GO:0046983
Vivi5g04782 241 Gene3D - 158 238 IPR036638 GO:0046983
Vivi5g04782 241 MobiDBLite consensus disorder prediction 156 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04782 1 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 36.187 4.95e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04782 - - mtr:11405720 369.777