Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi5g04773 | ATGGATTTGAGCGAAGAAGTTAGACAAGCTCACAAGCGAGAGTTCGCCGATTTCCTGGATCAAGATATCGGAAAGAGCATTTACATGGATGCAATCAAAGCTCTAATCAACCACAAGCGCCACCGTCTCATTGTCAACATCTCCGATCTCCATAACTACCAGGATTTGGGTAACAGGATTCTAAGAAACCCGAGTGAGTATATGCAATCATTCTGTGATGCTGTGACTGATGCTGCTCGTGCTATTGATCCAAAGTATTTGAAGGAAGGGGAACAGGTTCTTGTGGGACTTGAAGGCCCTTTTGTTTCTCGCAGGGTTACACCTAGGGACCTTCTCTCTGAATTCATAGGCTCTATGGTTTGTGTTGAGGGCATTATCACCAAATGTTCTCTTGTAAGGCCAAAGGTTGTTAAAAGTGTTCATTTCTGCCCCACCACTGGCAGCTTCACGCACCGTGATTATCGAGATATTACATCTAATTTGGGTTTGCCCACAGGGTCTGTGTATCCCACAAGGGATGAAAATGGCAACTTACTTGTGACCGAGTATGGGTTGTGCAAATACAAGGATCACCAAACCTTATCCATGCAGGAAGTTCCTGAAAATTCTGCGCCTGGTCAGCTCCCAAGAACAGTGGATGTCATAGCAGAGGACGACCTTGTTGATTCTTGCAAGCCTGGAGATCGTGTGGCTATTGTTGGGATATATAAGGCTCTTCCAGGAAAAAGCAAGGGCAGTGTTAATGGTGTATTCAGGACTGTGCTCATAGCCAACAATGTAGCTCTTCTCAATAAAGAAGCTAATGCTCCGATCTACAGCGCCGACGACCTTAAAGAGATAAAAAAGATTGCTGAAAGAGATGATACATTTGATTTGCTTGGTAATTCACTTGCACCTTCCATACATGGACATGCTTGGATAAAGAAAGCAGTGATTTTATTGATGCTTAGTGGAGTAGAGAAGAACTTAAAGAATGGCACTCATTTGAGAGGTGACATTAACATGATGATGGTTGGTGATCCCTCTGTTGCCAAGTCTCAACTTTTGAGAGCAATTATGAATATTGCCCCCTTGGCCATATCAACTACAGGTCGGGGTTCTTCTGGGGTTGGTTTGACAGCAGCAGTTACTTCAGATCAGGAAACAGGAGAAAGAAGGCTCGAAGCTGGGGCAATGGTTCTTGCTGACAGAGGTGTAGTCTGCATTGATGAATTTGACAAAATGAACGACCAAGATCGTGTAGCTATACACGAAGTTATGGAACAGCAGACTGTAACTATTGCTAAAGCTGGGATCCATGCATCACTCAATGCTCGTTGCAGCGTGGTGGCGGCTGCAAATCCCATATATGGAACTTATGATCGTTCACTGACTCCAACTAAAAATATTGGACTCCCGGACTCTTTGCTTTCTCGATTTGATTTGTTGTTTATTGTGTTGGATCAAATGGATCCTGATATTGATCGCCAAATATCAGAGCACGTCCTGCGTATGCATCGATTTCGTTCTGCCATTGATGGAGGCGAGGCAGCACATGATGGGAGTGCAAGATATGGACGAGAAGAGGAAGCTGATACTGAGACATCTGTCTTTGTCAAATATAACAGAATGCTACATGGAAAGAAAACTGATAGAGGTCGCAAGCGCGATACACTTACAATTAAGTTTCTTAAAAAGTATATCCATTATGCCAAGCATAGGATTCAACCTGACTTGACTGATGAGGCATCTGACCAGATCGCCACTGCATATGCTGAGCTCAGAAATGCGAATTCAAATGCGAAGACTGGAGGAACACTTCCTATTACTGCCAGAACCTTAGAAACCATAATACGTCTCTCAACTGCTCATGCCAAATTGAAGTTGAGCAGAAAGGTTACAAAGTCTGATGTGGATGCTGCTTTGAAGATTCTTAATTTTGCAATATATCATAAAGAGCTGACAGAAATGGATGAGCGTGAAGAAGAGAGGGAAAGAGAACAGGAGAGGAAGCGTAAGGCTGACGGTGAAAATAATGGTCCTGATCGTGGTTCTAAAACCAGAAGAGACTCAACATCAGATGCCATGGAAGTAGACGATACCTCAGCTGCCCAACCAGCTATTGGTCTCACTCCTGAAAGAATCGAAGCATTCAATTCCCTATTTGGTCAGCATATGCGTGCCAATCGCTTGGATCAAATATCTATTGCAGACATAGAAGATGTTATCAATAGAGGGTCCGGTTCCACTTACAGCTCAGCAGATATATTGCTTCTATTGGAGAAATTGCAAGAAGACAATAGATTGATGATAGTTGATGGAATGGTGCATATGGTTTCATAA | 2322 | 0.4324 | MDLSEEVRQAHKREFADFLDQDIGKSIYMDAIKALINHKRHRLIVNISDLHNYQDLGNRILRNPSEYMQSFCDAVTDAARAIDPKYLKEGEQVLVGLEGPFVSRRVTPRDLLSEFIGSMVCVEGIITKCSLVRPKVVKSVHFCPTTGSFTHRDYRDITSNLGLPTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIAEDDLVDSCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVALLNKEANAPIYSADDLKEIKKIAERDDTFDLLGNSLAPSIHGHAWIKKAVILLMLSGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDIDRQISEHVLRMHRFRSAIDGGEAAHDGSARYGREEEADTETSVFVKYNRMLHGKKTDRGRKRDTLTIKFLKKYIHYAKHRIQPDLTDEASDQIATAYAELRNANSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVTKSDVDAALKILNFAIYHKELTEMDEREEEREREQERKRKADGENNGPDRGSKTRRDSTSDAMEVDDTSAAQPAIGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGSGSTYSSADILLLLEKLQEDNRLMIVDGMVHMVS | 773 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi5g04773 | 773 | Coils | Coil | 643 | 672 | - | - | |
| Vivi5g04773 | 773 | Gene3D | - | 135 | 189 | - | - | |
| Vivi5g04773 | 773 | MobiDBLite | consensus disorder prediction | 650 | 702 | - | - | |
| Vivi5g04773 | 773 | SMART | mcm | 104 | 643 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Vivi5g04773 | 773 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 299 | 650 | IPR027417 | - | |
| Vivi5g04773 | 773 | FunFam | DNA helicase | 135 | 189 | - | - | |
| Vivi5g04773 | 773 | Gene3D | - | 3 | 99 | - | - | |
| Vivi5g04773 | 773 | Pfam | MCM AAA-lid domain | 556 | 639 | IPR041562 | - | |
| Vivi5g04773 | 773 | SUPERFAMILY | Nucleic acid-binding proteins | 13 | 259 | IPR012340 | - | |
| Vivi5g04773 | 773 | Pfam | MCM N-terminal domain | 12 | 83 | IPR027925 | - |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi5g04773 | K02541 | - | gmx:100811545 | 1330.47 |
Showing 1 to 1 of 1 entries