Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04728 ATGGAAGGTTTTCACCCATCTATGAATATGAGTATGAGCATGAACCCTTCTTTTTCATACACTTTCCCTATCACTGCTACTGCTTCTGGTGCTATCACCAATATCACTACTACTACTACTACCGCCACTTACAACACTACCAGTACTACTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCAAAGACTCCTTGATCGCATCATTGCTTTCCTTCCTCCACCTGCTTTCTTTCGTGCACGTGCTGTTTGCAAGAGATTTTACTCTCTTCTCTTTTCCAACTCTTTCCTTGAGTTATACCTTCAAGTTTCACCTCGTTTCCACTGGTTCATTTTCTTCAAACATAAAACCAGATCAAAAACACACATCTACAAAAACAGCAACAACACCATCACTGATGATAATTCCTTTGAAGGCTACATCTTTGATCCTAATGAAGTGACATGGTACCGTATTTCCTTTGCTTTAATCCCTTCTGGTTTCTCACCATCTTCTTCATCTGCCGGTTTACTATGCTGGGTTTCTGATGAGTCCGGTCCAAAAACAATGCTTCTCTCAAACCCTATACTCGGTTCCATTACTCAGTTACCACCAACATTAAGACCAAGACTCTTCCCTTCAATAGGTTTAACCATTACTCCATCTTCCATAGATGTTACTGCTGCAGGTGATGACATGATATCACCTTATGCAGTCAAAAACCTTTCATCTGAAAGCTTTCACATCGATGCAAGTGGGTTTTATTCCATTTGGGGAACAACCTCTTCATTACCAAGACTATGTAGTCTTGAATCAGGTAGAATGGTTTATTCACAAGGGAAATTTTACTGCATGAACTGTAGTCCTTTTAGTGTTTTAGCCTATGATATAGCTACAAACACTTGGTTCAAAATTCAAGCTCCTATGAGGAGGTTTTTAAGGTCACCTAATCTGGTTGAATGCAAAGGAAAGCTGTTACTTGTTGCTGCGGTTGAGAAGAGTAAGCTGAATGTTCCAAAGAGTCTGAGGGTTTGGAGTTTGCAAGGCTGTGGAAGTGTGTGGGTGGAAACTGAGAGAATGCCACAACAACTTTATGTTCAGTTTGCTGAGATGGAAAACGGGAATGGATTTGAGTGTGTTGGGAATGGTGAGTTTATTGTGATAATGATAAAAGGGAGTGATAAGGGTTTGGTGTATGATATAGGAAGGAAGAGGTGGCAGTGGATGCCACCATGTCCTTATGCTGGTTATGATGGGTTTGAGTTGCATGGTTTTGCTTATGATCCTAGGTTGGCTACACCTGTTACTGCTCTACTTGATCAGTTGGCAATGCCTCTTCCTCAGTTTTAA 1332 0.4099 MEGFHPSMNMSMSMNPSFSYTFPITATASGAITNITTTTTTATYNTTSTTPWMNSRIWSKLPQRLLDRIIAFLPPPAFFRARAVCKRFYSLLFSNSFLELYLQVSPRFHWFIFFKHKTRSKTHIYKNSNNTITDDNSFEGYIFDPNEVTWYRISFALIPSGFSPSSSSAGLLCWVSDESGPKTMLLSNPILGSITQLPPTLRPRLFPSIGLTITPSSIDVTAAGDDMISPYAVKNLSSESFHIDASGFYSIWGTTSSLPRLCSLESGRMVYSQGKFYCMNCSPFSVLAYDIATNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQGCGSVWVETERMPQQLYVQFAEMENGNGFECVGNGEFIVIMIKGSDKGLVYDIGRKRWQWMPPCPYAGYDGFELHGFAYDPRLATPVTALLDQLAMPLPQF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04728 443 FunFam protein UNUSUAL FLORAL ORGANS 54 98 - -
Vivi5g04728 443 SUPERFAMILY Galactose oxidase, central domain 140 411 IPR011043 -
Vivi5g04728 443 Gene3D - 234 426 IPR015915 GO:0005515
Vivi5g04728 443 SUPERFAMILY F-box domain 50 130 IPR036047 GO:0005515
Vivi5g04728 443 ProSiteProfiles F-box domain profile. 55 104 IPR001810 GO:0005515
Vivi5g04728 443 Pfam F-box domain 58 94 IPR001810 GO:0005515
Vivi5g04728 443 Gene3D - 53 99 - -
Vivi5g04728 443 PANTHER BNACNNG10540D PROTEIN 47 426 - -
Vivi5g04728 443 SMART fbox_2 61 101 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04728 - - cam:101505902 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04728 5 146078871 146080393 Vivi5g04728 5 146078871 146080393 ECH