Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04687 ATGGCTTTTCCAAAACCAGCTTTTAAGTCTAACCTATTTCTTCATTCTAACTTTACCTCTCGTTGTGTTACAAACTCTCTTCCTAGGTTCCGCATACCAAAGAAATCAATGCCAAAAGAAGCTGCGTACCAGAACATACGCGATGAGTTGCGGCTGGATGCTAATCCAAAGTTGAACTTAGCTTCCTTTGTGACCACAACCATGGAGGAAGAATGCAACAAGCTTATTATGGAATCGATCAACAAAAACTACGTCGACATGGATGAGTATCCAGCTACCACTGATCTTCATAATCGATGTGTGAACATGATAGCGCGTATGTTCAACGTTGAGATTGGAGAAAATGAGAGTGCAATTGGTGCGGGAACAGTTGGATCATCTGAGGCCATAATGCTGGCAGGACTTGCATTCAAGAAAAAGTGGCAGAACAAACGTAAGGCTGAAGGAAAACCTTATGATAAGCCCAACTTGGTCACTGGTGCTAATGTGCAGGTGTGTTGGAAGAAATTTGCTAGATATTTTGAAGTCGAACTGAGGGAAGTGAAAGTTAGAGAAGATTACTATGTAATGGAACCTGCCAAAGCTATTGAGATGGTAGATGAGAATACAATTTGTGTGGCTGCAATCTTAGGTTCAACTTTTAATGGAGAATTTGAAGATGTTAAACTCTTGAATGATCTCTTGTTAGAGAAAAACAAACAAAATGGATGGGATACACCTATTCATGTGGATGCTGCAAGTGGTGGTTTTATTGCTCCTTTTTTATATCCTGAGCTAGAATGGGATTTCAAACTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCATAAGTATGGCCTTGTTTATGCAGGGATAGGTTGGGTTATATGGAGGTCAAAAGAAGACTTGCCTGAAGATCTTATCTTTCATATTAACTATCTTGGAGCTGACCAACCCACCTTCACCCTAAATTTTTCAAAAGGTTCAAGTCAGATAATTGCTCAATATTATCAACTAATTCGTCTTGGTCAAGAGGGTTACCGGAGTATAATGGAGGATTGCAGAGAAAATGCAATGGTGTTGAAGGAACACTTGGAAGAGACTGGATACTTTAACATACTTTCAAAAGACAATGGAGTTCCTATGGTAGCATTTTCTCTCAAGGACAGAAACCAGTACGATGAATTCAAGATATCGGAGATGTTGCGGCGCCATGGTTGGATTGTTCCGGCCTATCCAATGCCAGCAGGTACAGCGACAGGTTGA 1245 0.4056 MAFPKPAFKSNLFLHSNFTSRCVTNSLPRFRIPKKSMPKEAAYQNIRDELRLDANPKLNLASFVTTTMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARMFNVEIGENESAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGANVQVCWKKFARYFEVELREVKVREDYYVMEPAKAIEMVDENTICVAAILGSTFNGEFEDVKLLNDLLLEKNKQNGWDTPIHVDAASGGFIAPFLYPELEWDFKLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMEDCRENAMVLKEHLEETGYFNILSKDNGVPMVAFSLKDRNQYDEFKISEMLRRHGWIVPAYPMPAGTATG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04687 414 Gene3D - 1 65 - -
Vivi5g04687 414 FunFam Glutamate decarboxylase 66 360 - -
Vivi5g04687 414 SUPERFAMILY PLP-dependent transferases 13 409 IPR015424 -
Vivi5g04687 414 Gene3D - 66 360 IPR015421 GO:0003824
Vivi5g04687 414 NCBIfam glutamate decarboxylase 17 411 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi5g04687 414 Gene3D - 361 413 - -
Vivi5g04687 414 PANTHER GLUTAMATE DECARBOXYLASE 14 410 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vivi5g04687 414 FunFam Glutamate decarboxylase 5 65 - -
Vivi5g04687 414 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04687 Vivi-Chr5 145596122 145598053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04687 1 409 Calmodulin-binding Proteins AT2G02010 77.751 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04687 K01580 - gmx:100781791 751.125