Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04663 ATGGAAAACAACCCACTTCACCTTTTACCTCATCTCACTCTAACCCTCCTTCTCACAATCATCATCACCATAGTTTTCTCTCCCATGATCACTACTGCAGAATCACCTGCACCAGTTTCTTCTATCAAAACCGACGCAACCGCGCTTCTCACATTCAAAAACATGATTCAGAAGGATCCAAATGGAGTCTTATCTGGTTGGAATCCAAAAACCAACCCATGCACATGGTTTGGCATCACTTGCACCCTTGGAAGAGTCACTGGCCTAGAAGTTACCGGAATCAATGATCTTTCCGAAACCATTTCGCTTGATCGTTTATTCTCTTTAGATATGTTATCTGTTTTGAAGCTTTCTCTCAACTCATTTTCTGTAAATTCTTCTTCTTTGCTTCTGTTACCATATAGTTTAACTCAACTTGATCTTTCCTTTGGTAAAGTTACAGGTCCTGTCCCTGAGAATCTATTCTCCAACTGTCCTAATCTTGTTGTTGTGAATCTTTCTTACAACAATTTGACAGGTCCTATACCTGAAAATTTTATACAAAATTCTGATAAGCTTCAGTCCCTTGATCTCTCGTCGAACAATTTGACAGGTTCGATTTCTGGTTTGAGGATTGAGTACTGCAAATCGTTGTTGCAGATTGATCTATCAGGAAACCATTTATCAGACTCGATACCGGTTTCTCTGTCGAATTGCACTAGTCTCAAGAGTTTGAATTTAGCTAACAATTTCATATCTGGTGGAATTCCGAAGAGTTTAGGTGAGTTGAAGAGGTTACAGACTTTGGATCTTTCACACAATCAAATTACTGGTTGGATCCCTTCTGAGTTGGGAAATGTTTGTGGTTCTCTTTTAGAACTCAAACTTTCTTTCAACAATATTACTGGTTCGATTCCGGGTGGTTTCAATTCTTGCACTTGGCTGCAACTTGTTGATATTTCCAACAATAATATGACAGGTGAATTGCCTGAGACGGTGTTTCGGAGCCTTGGATCTTTGGAGGAGCTTAGGTTGGGAAATAATGCTATCTCTATGAAGTTTCCATCTTCATTATCTTCTTGCAAAAAGTTGAGGATTGTGGATTTCAGCTCGAATAAGATTTACGGAACCATCCCTAGAGACTTGTGTCCAGGTGCAGGCTCACTTGAAGAACTGAGAATGCCTGATAACCTCATAACAGGTGAGATTCCTGCTGAATTATCGAAGTGTTCGCAATTGAAGACTATTGATTTTAGTTTGAATTATTTGAACGGTTCGATTCCGGATGAGTTGGGAGAGCTTGAGAATCTTGAGCAGTTGATAGCATGGTTCAATGGTTTGGAAGGAAAGATTCCAGCAAAGTTGGGACAATGTAAGCATCTTAAGGATTTAATATTGAATAACAATCACCTTAGTGGTGAAATTCCTATTGAGTTGTTTAATTGCAGCAATCTTGAATGGATATCATTGACAAGCAATGAACTAACGGGCGAAATACCGAAAGAGTTCGGACTTTTGACGAGGCTAGCTGTTCTTCAGCTTGGAAACAATAGCTTCTCAGGTGAGATACCATCAGAGTTAGCAAATTGCAACAGTTTGGTGTGGTTGGATTTGAACAGCAATAAGCTCACAGGAGAGATCCCTCCTAGACTTGGAAGGCAGCAAGGAGCGAAATCGTTGTTTGGTATTCTGTCAGGAAACACTCTGGTTTTTGTACGAAACGTTGGAAACTCGTGTAAAGGTGTTGGAGGTTTGTTAGAATTCTACGGAATCCGGTCTGAACGGCTTTCGCAGATACCGACATTGAGGTCTTGTGATTTCACTAGACTGTATTCTGGTCCTGTGCTCAGCCTGTTTACCAAGTATCAGACTCTTGAGTATCTTGACCTCTCTTACAATCAGCTTCGCGGAAAAATACCGGACGAATTCGGAGATATGATTGCCTTACAGGTACTTGAATTGTCTCACAATCAACTATCTGGTGAAATCCCTTCATCCCTTGGCCAGCTCAAAAATTTGGGAGTGTTTGATGCATCACATAATAGACTTCAGGGTCATATCCCAGACTCATTCTCAAACCTATCATTTTTAGTGCAAATAGATCTATCTTACAATGAGTTAACAGGTCAAATTCCATCTAGGGGACAGCTTAGTACACTTCCAGCCACTCAATTTGCAAACAATCCCGGCCTTTGTGGTGTCCCGTTGCCCGACTGCAAGAATGACTACGGCCAATCGACACCAAATCCAAGTGATGATGTTAGCAAAGGAAGCCATAGAAGATCAGTTGCTTCATGGGCAAACAACATTGTCATGGGAGTTCTCATTTCTGTTGCTTCTGTATGTATTTTGATTGTGTGGGTGATTGCAATGCGCGTAAGGAGGAAAGAGGCTGATGAAGTGAAGATGCTTAAAAGATTGCAAGCATGCCATGCTGCTACGACATGGAAAATCGACAAAGAGAAAGAGCCGTTAAGCATTAATGTTGCAACATTTCAGAGGCAGTTAAGGAAGCTTAAATTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGAAAGCCTAATTGGTTGCGGTGGTTTCGGTGAAGTGTTCAAGGCGACACTCAAAGACGGATCATCTGTCGCGATAAAGAAGCTCATTCGACTGAGTTGCCAAGGCGATAGAGAGTTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAGCATAGAAATCTTGTCCCTTTGTTAGGATACTGCAAAGTAGGTGAGGAGAGGCTACTTGTTTATGAATACATGGAATATGGAAGCTTAGAAGAGATGCTCCACGGAAGAATAAAGACACGCGATCGACGCATTTTAACCTGGGAAGAAAGGAAGAAAATTGCAAGAGGTGCTGCTAAAGGACTTTGTTTTTTGCACCATAATTGCATCCCTCACATCATACACAGAGACATGAAATCAAGCAACGTGTTACTTGATCATGAAATGGAGTCAAGGGTCTCGGATTTCGGAATGGCAAGACTAATAAGCGCGCTCGATACACATCTTAGCGTAAGCACACTAGCAGGAACACCAGGATATGTTCCACCAGAATACTACCAAAGTTTCAGGTGCACTGCAAAGGGTGATGTTTACTCATTTGGTGTTGTAATGTTGGAGCTTCTTAGCGGGAAGCGTCCAACCGATAAAGAGGATTTCGGTGACACAAACTTGGTCGGATGGGCTAAGATTAAAGTGCGCGAAGGGAAACAAATGGAAGTGATTGATACTGATTTGCTTTTGGAGACTCAAGGAGGAACAAATGAAGCAGAAGTGAAAGAAATGTTGAGGTATTTGGAGGTTACGTTGCGGTGTGTCGATGATTTGCCTTCGAAAAGGCCAAGCATGTTGCAGGTAGTTGCTATGTTGAGAGAGCTTATGCCAGGATCAAATGAAGGAAGCAGCAACAGTGCTTAG 3420 0.4167 MENNPLHLLPHLTLTLLLTIIITIVFSPMITTAESPAPVSSIKTDATALLTFKNMIQKDPNGVLSGWNPKTNPCTWFGITCTLGRVTGLEVTGINDLSETISLDRLFSLDMLSVLKLSLNSFSVNSSSLLLLPYSLTQLDLSFGKVTGPVPENLFSNCPNLVVVNLSYNNLTGPIPENFIQNSDKLQSLDLSSNNLTGSISGLRIEYCKSLLQIDLSGNHLSDSIPVSLSNCTSLKSLNLANNFISGGIPKSLGELKRLQTLDLSHNQITGWIPSELGNVCGSLLELKLSFNNITGSIPGGFNSCTWLQLVDISNNNMTGELPETVFRSLGSLEELRLGNNAISMKFPSSLSSCKKLRIVDFSSNKIYGTIPRDLCPGAGSLEELRMPDNLITGEIPAELSKCSQLKTIDFSLNYLNGSIPDELGELENLEQLIAWFNGLEGKIPAKLGQCKHLKDLILNNNHLSGEIPIELFNCSNLEWISLTSNELTGEIPKEFGLLTRLAVLQLGNNSFSGEIPSELANCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFYGIRSERLSQIPTLRSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMIALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQFANNPGLCGVPLPDCKNDYGQSTPNPSDDVSKGSHRRSVASWANNIVMGVLISVASVCILIVWVIAMRVRRKEADEVKMLKRLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKIKVREGKQMEVIDTDLLLETQGGTNEAEVKEMLRYLEVTLRCVDDLPSKRPSMLQVVAMLRELMPGSNEGSSNSA 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04663 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 281 - -
Vivi5g04663 1139 Gene3D - 557 613 - -
Vivi5g04663 1139 ProSiteProfiles Protein kinase domain profile. 844 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04663 1139 PRINTS Leucine-rich repeat signature 186 199 - -
Vivi5g04663 1139 PRINTS Leucine-rich repeat signature 256 269 - -
Vivi5g04663 1139 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 376 564 - -
Vivi5g04663 1139 SUPERFAMILY RNI-like 206 445 - -
Vivi5g04663 1139 CDD STKc_IRAK 850 1127 - -
Vivi5g04663 1139 SMART LRR_typ_2 256 280 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 687 720 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 499 523 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 330 354 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 639 663 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 451 475 IPR003591 -
Vivi5g04663 1139 SMART LRR_typ_2 525 547 IPR003591 -
Vivi5g04663 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Vivi5g04663 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 610 732 - -
Vivi5g04663 1139 SMART serkin_6 844 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04663 1139 SUPERFAMILY Protein kinase-like (PK-like) 825 1124 IPR011009 -
Vivi5g04663 1139 ProSiteProfiles Leucine-rich repeat profile. 258 279 IPR001611 GO:0005515
Vivi5g04663 1139 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 381 1126 - -
Vivi5g04663 1139 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Vivi5g04663 1139 SMART LRR_sd22_2 663 689 - -
Vivi5g04663 1139 SMART LRR_sd22_2 183 205 - -
Vivi5g04663 1139 SMART LRR_sd22_2 256 277 - -
Vivi5g04663 1139 Gene3D Phosphorylase Kinase; domain 1 803 919 - -
Vivi5g04663 1139 SUPERFAMILY L domain-like 44 279 - -
Vivi5g04663 1139 Gene3D Transferase(Phosphotransferase) domain 1 920 1137 - -
Vivi5g04663 1139 SUPERFAMILY L domain-like 381 732 - -
Vivi5g04663 1139 FunFam serine/threonine-protein kinase BRI1-like 2 920 1135 - -
Vivi5g04663 1139 FunFam serine/threonine-protein kinase BRI1-like 2 44 156 - -
Vivi5g04663 1139 Pfam Leucine rich repeat 213 269 IPR001611 GO:0005515
Vivi5g04663 1139 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Vivi5g04663 1139 Pfam Leucine rich repeat 135 196 IPR001611 GO:0005515
Vivi5g04663 1139 Pfam Leucine rich repeat 611 652 IPR001611 GO:0005515
Vivi5g04663 1139 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Vivi5g04663 1139 FunFam serine/threonine-protein kinase BRI1-like 2 805 919 - -
Vivi5g04663 1139 Pfam Protein tyrosine and serine/threonine kinase 847 1123 IPR001245 GO:0004672|GO:0006468
Vivi5g04663 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 282 371 - -
Vivi5g04663 1139 ProSitePatterns Protein kinases ATP-binding region signature. 850 873 IPR017441 GO:0005524
Vivi5g04663 1139 Pfam Brassinosteroid receptor island domain 554 612 IPR045381 -
Vivi5g04663 1139 Gene3D Ribonuclease Inhibitor 102 732 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04663 Vivi-Chr5 145296011 145299788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04663 17 1136 Receptor kinase-like Gene Family AT1G55610 47.246 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Vivi5g04663 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04663 - - mtr:120577570 1993.01