Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04656 ATGGATGATGATGTGTTGAATATGCCCAATTGGGGTTACTATGAGCCCTTCAAGGGTGGGAATCTTGGTCTGAACCTCATGCCTGATATTAATGATCGGGAAACGAAACCGTTTTTTCCTGGTCGTGATCCGGCTATGTTAGTAGGTGCGAATGGAGGTTTTCATCCTCGTGATGGTGCTGTTGTTGAGCCTCCTGCTCAGCTGAACTATGTCAGGGATAATTGGATGAACCCAAGACATAGGTTTTATAATATGCAGCTTGCGAATTCGAGTTATGCTGCTGTTTTTCCTGAAACATCGCAGGCACTCTCCTTGCCGTTTGTCCAACCACCGGCGGATGTATCGAGAAATGAGAATGGGGATGGGATTGAAGAGTTGGGTGTTAAGAAGGAAGGGGGCAAGGCGAAGAAAAGGAAATCAAAGGGTGCTCTTACCGTTCCAAAAGCTAAGAAACCCAAGAAGGCAAAGGAGAATGGCAATAGTTCAGCTCAAGGTGTGAAACCACCGAAGAAGACTGTGGCGCTTGAAATAAATGGAATTGAAATGGACATTTCTGGTCTACCTGTTCCTGTTTGTTCATGCACTGGGAGTCCTCAGCAGAGTTATCGATGGGGCTGTGGAGGTTGGCAATCAGCTTGCTGTACTACAAATGTGTCAATTTATCCTTTGCCGATGAGCGTCAAAAGGCGTGGCGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGAGCTTTCAAAAAGGTTTTAGAAAAGCTTGCAGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACAATCAGATAG 843 0.4567 MDDDVLNMPNWGYYEPFKGGNLGLNLMPDINDRETKPFFPGRDPAMLVGANGGFHPRDGAVVEPPAQLNYVRDNWMNPRHRFYNMQLANSSYAAVFPETSQALSLPFVQPPADVSRNENGDGIEELGVKKEGGKAKKRKSKGALTVPKAKKPKKAKENGNSSAQGVKPPKKTVALEINGIEMDISGLPVPVCSCTGSPQQSYRWGCGGWQSACCTTNVSIYPLPMSVKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04656 280 MobiDBLite consensus disorder prediction 118 132 - -
Vivi5g04656 280 MobiDBLite consensus disorder prediction 111 169 - -
Vivi5g04656 280 PANTHER - 1 280 IPR010409 -
Vivi5g04656 280 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Vivi5g04656 280 SMART GAGA_bind_2 1 280 IPR010409 -
Vivi5g04656 280 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04656 Vivi-Chr5 145203366 145205372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04656 1 280 BBR or BPC Transcription factor family AT2G01930 56.522 4.75e-102 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vivi5g04656 GAGA_bind 1.7e-96 No_clan