Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04589 ATGGCATCAACAATAGTTCGTAGAAACATCACCCAAAACTTGAAAAAGTTTCCGCTTTTATCTTCTTCGCTTTTCAATAATAACCACTTATTCAACGTTGAACCTTCCAGCACCGTTTCCTTTCACTCAGAATCCGTTGCCGGCGGTGGTGGTGGTGGATTGCCGTCTTATATGCGTGGAGCTGTTTATTGGGAACCTAACAAACCTCTCACCATTGAAGAGTTTCACATTCCTCGCCCTAAAGCCGGTGAACTTCTCATCAAAACCAAAGCATGTGGAGTGTGCCACTCTGATCTTCATGTCATGAAAGGTGAAATTCCATTTACAAGTCCTTGTGTTGTAGGGCATGAGATTACTGGGGAAGTTGTTGAACATGGACAAAACACCGATTCCAAAACCATAGAAAGGCTTCCGGTTGGATCTCGGGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCTTATTGTTCAAAGGGCCATGATGATCTGTGTGAAGCTTTCTTTGCTTATAACCGGGCTAAAGGAACCCTCTACGATGGTGAAACTCGACTATTTCTTCGAAGTAGTGGAAAACCGGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCAGCAAATGCATTGGCTGTATTACCAAGCTCAATGCCATATACCGAGTCTGCAATTTTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTGCGTCCGGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGCTGTTTGCAGATAGCTAGAGCATTCGGTGCCTCGGATATAATTGCTGTTGATGTTCAGGATAACAAGCTAGAGAAAGCAAAGACACTCGGTGCTACTCACACTATAAATTCGGCAAAGGAAGATCCCATTGAAAAGATACTTGAAATTACTGGTGGAAAAGGCGTTGATGTTGCTGTTGAAGCCTTGGGATTACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCAGTGATGATTGGACTGGCCAAAGCTGGTTCTTTAGGAGAGGTGGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTTATTGGCTCCTATGGAGGCAGGGCTAGACAAGATCTTCCAAAGTTAATTAGATTAGCAGAAACAGGTATCTTTGACCTTGGCCATGCTGTTACAAAAAAATACACTTTTGAGGAGTCTGGCAAAGCATTCAAGGATCTCAACGAAGGAAAAATCGTCGGTCGAGCTGTTATCGAGATAGTATAA 1290 0.4364 MASTIVRRNITQNLKKFPLLSSSLFNNNHLFNVEPSSTVSFHSESVAGGGGGGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGELLIKTKACGVCHSDLHVMKGEIPFTSPCVVGHEITGEVVEHGQNTDSKTIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRSSGKPVFMYSMGGLAEYCVVPANALAVLPSSMPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDNKLEKAKTLGATHTINSAKEDPIEKILEITGGKGVDVAVEALGLPQTFAQCTQSVKDGGKAVMIGLAKAGSLGEVDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVTKKYTFEESGKAFKDLNEGKIVGRAVIEIV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04589 429 Pfam Alcohol dehydrogenase GroES-like domain 83 213 IPR013154 -
Vivi5g04589 429 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 57 426 - -
Vivi5g04589 429 Pfam Zinc-binding dehydrogenase 258 389 IPR013149 -
Vivi5g04589 429 SUPERFAMILY GroES-like 54 261 IPR011032 -
Vivi5g04589 429 FunFam Alcohol dehydrogenase (Zinc) 62 247 - -
Vivi5g04589 429 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 220 393 IPR036291 -
Vivi5g04589 429 Gene3D - 235 372 - -
Vivi5g04589 429 SMART PKS_ER_names_mod 65 426 IPR020843 GO:0016491
Vivi5g04589 429 CDD Zn_ADH10 58 427 - -
Vivi5g04589 429 FunFam Sorbitol dehydrogenase 235 373 - -
Vivi5g04589 429 Gene3D - 62 418 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04589 72 347 Monolignol Biosynthesis Gene Families AT4G37970 27.046 3.13e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04589 - - gmx:100775182 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04589 5 144164999 144167828 Vivi5g04589 5 144164999 144167828 ECH