Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04573 ATGGCTTCTCCTCCATTGCCGGTAGCATACCAAGCATGGACATCTCAAGCAGTACCAGACTGGCTAAACAAAGGAGACAACACATGGCAAATGGTATCAGCCACTCTTGTCGGAATCCAAAGCATGCCGGGACTCGTGATCCTCTACGGCAGCATAGTCAAAAAGAAATGGGCAGTAAACTCAGCTTTCATGGCGCTTTACGCTTTCGCAGCGGTCATAATCTGTTGGGTTACATGGGCTTATAAGATGTCATTTGGTGAAAAACTCTTACCATTTTGGGGTAAGGCCGGGCCGGCTTTAGGCCAGAAATTTCTTATCAACCAGGCCGGGCTACCGGCTACGACGCATTACTATCACAATGGAGTAGTTGAAACCGCTGAAGCTACGCCGTTTTATCCGATGGCGACTATGGTTTGGTTTCAGTGTGTTTTTGCAGCTATTTCGGTGGTTATATTGGCGGGGTCGGTTTTGGCGAGGATGAGTTTTAAGGCGTGGATGATGTTTGTGCCTCTTTGGTTAACTTTTTCTTATACTGTTGGTGCTTTTAGTTTGTGGGGTGGTGGGTTTTTGTTTCAATGGGGTGTTATGGATTATTCTGGTGGTTATGTTATTCATCTTTCTTCTGGAATTGCTGGTTTCACTGCTGCTTATTGGGTGGGGCCTAGATCAAAGAAGGACAGGGAGAGGTTCCCACCAAACAACGTGTTACTAACGTTGGCGGGGGCAGGTTTACTATGGTTAGGATGGGCTGGTTTCAACGGTGGAGATCCTTATTCGGCCAACACTGATTCCTCCATGGCTGTTCTTAACACAAACATTTGTGCAGCTACAAGCCTTTTGGTTTGGACATGGCTTGATGTGATTTATTTCAAGAAACCATCTGTTATTGGAGCTGTTCAAGGCATGATCACTGGTCTTGTTTTTTGCATCACTCCTGGAGCTGGTCTGGTTCAAGGATGGGCAGCCATAATAATGGGAGTATTATCAGGAAGCGTACCATGGTACACAATGATGGTTCTTGGAAAAAAGTTCACAATATTTCAAAAGGTGGACGACACACTCGCCGTCTTCCACACTCACGCGGTGGCCGGCCTTCTAGGCGGTATCCTCACCGGCCTCTTCGCGGAGCCAAGACTAAGTTCTCTCTTTCTCCCCGTCACAAACTCCAAAGGTGGTGTCTACGGAGGCTCCGGTGGTGTCCAAATCCTCAAACAAATAGTTGGAGCATTATTCATCATTGGATGGAACATTGTTGCCACTTCAATTATTTGTCTAGTTGTAGGTTTTTGTGTTCCTTTGAGAATGACAGAGGAAGAGTTGCTTATTGGAGATGATGCTGTTCATGGGGAAGAAGCTTATGCTTTGTGGGGTGATGGAGAGAAACTTAGTCTTTATAAAGATGATACTACTACAGGACAGGGAGTTTTGGCTTCAAGTGGTGCCACTCAAGTTGTCTAG 1458 0.4609 MASPPLPVAYQAWTSQAVPDWLNKGDNTWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLINQAGLPATTHYYHNGVVETAEATPFYPMATMVWFQCVFAAISVVILAGSVLARMSFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIYFKKPSVIGAVQGMITGLVFCITPGAGLVQGWAAIIMGVLSGSVPWYTMMVLGKKFTIFQKVDDTLAVFHTHAVAGLLGGILTGLFAEPRLSSLFLPVTNSKGGVYGGSGGVQILKQIVGALFIIGWNIVATSIICLVVGFCVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTTGQGVLASSGATQVV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04573 485 FunFam Ammonium transporter 9 456 - -
Vivi5g04573 485 ProSitePatterns Ammonium transporters signature. 197 222 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vivi5g04573 485 PANTHER AMMONIUM TRANSPORTER MEP2 13 462 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vivi5g04573 485 NCBIfam ammonium transporter 26 453 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vivi5g04573 485 SUPERFAMILY Ammonium transporter 21 435 - -
Vivi5g04573 485 Gene3D Ammonium transporter AmtB like domains 7 456 IPR029020 -
Vivi5g04573 485 Pfam Ammonium Transporter Family 29 453 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04573 Vivi-Chr5 143948295 143956709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04573 134 467 Inorganic Solute Cotransporters AT2G38290 70.958 5.49e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04573 K03320 - gmx:100785993 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04573 5 143948295 143956709 Vivi5g04573 5 143948295 143956709 ECH