Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04567 ATGGGTAGATTCAATAACATCGTAGAAGAAGAGATGGTAAAAACCGCAACAATGGCCGTTAGAGGAGGTAGACGAAAAGCCGTTGCGATTGAAATCATGAGTTGGATGATTGTTTCAAAAACAGGCGAATCCGTCGTTGAGAGTATCGACAAACACTCGATCATGCGACGGACAGGATTACCGGCGCGCGATCTTAGGGTTCTTGATCCCGCGCTTTCGAGCCCTTCGTCTATTGTCGGACGAGAGAAATCCATTGTTGTTAACCTAGAACATATTAAAGCCATCATCATGTCAAATGAAGTGCTTTTGATTAATCTTTCTAGCCCTTTTTTTATTCGGTTCCTTCAAGATCTTCAAAAGCGTGTTCCGTGTAATATTCAAACGTCTATATCTGTTGCTGATGGCGTGGAAGGTGATCCTGAAAAGAAACCTTTATTGGAAGAAACGTCGCAGATCGGCGATGATTCTCCGAAAAATGCATGGGAGGGGAGTTTTGTGGATGGTGCACCTGTTGTAGCGGCTGAGACTAATCGTAAACCGTTACCATTTGAGTTCAGAGCTCTTGAGTCGTGTATTGAATCTGCATGTACGTGCCTTGAATCTGAGACTAAAAGATTGGAAAAAGAGGCTTATCCGGCGTTGGATGAATTGACTTCTCGAATTAGTACTCTCAATCTTGAACGTGTAAGACAGATTAAGAATCGTTTGGTTGCACTTTCGGGACGTGTGCAAAAGGTAGCAGATCAACTAGAACATTTGTTGGATGATGATAATGACATGGCTGAAATGTACTTGTCACAAAAGTCTGATGCTCACTTAATGGATCAAACACCAATAAAAGAAGGATGCAATTCACCTTTTGATGAATATATATACCAAGGTGATGAACCAGTTCAAGAAAAATCATATGAATCTAAGCCTAATGTTGAAGAATTGGAGATGCTCTTAGAAGCATATTTCGCACAAATAAATGGAATTTTGCAAAAATTGTCTAGCTTGAGTGAGTATGTGGATGACACAGAGGACTACATTAACATAATGTTGGATGATAAACGAAACCAACTACTACAAGTATCAGTAATATTCAACACAATAACTATGATAATCAACGCAGGTATTGTGGTGGTTGGATTGTTTGGCATGAATATTCATATTGATCTCTTTGATGGCCAACCTCGTCAATTTTGGGCCACAACAGTTGGCACAGTTGTGAGTTGCTTATTGCTATTCCTTGTTTCTATTTGGTGGGGTAAAAAAAAATATTTACTATCTGAATAG 1278 0.3967 MGRFNNIVEEEMVKTATMAVRGGRRKAVAIEIMSWMIVSKTGESVVESIDKHSIMRRTGLPARDLRVLDPALSSPSSIVGREKSIVVNLEHIKAIIMSNEVLLINLSSPFFIRFLQDLQKRVPCNIQTSISVADGVEGDPEKKPLLEETSQIGDDSPKNAWEGSFVDGAPVVAAETNRKPLPFEFRALESCIESACTCLESETKRLEKEAYPALDELTSRISTLNLERVRQIKNRLVALSGRVQKVADQLEHLLDDDNDMAEMYLSQKSDAHLMDQTPIKEGCNSPFDEYIYQGDEPVQEKSYESKPNVEELEMLLEAYFAQINGILQKLSSLSEYVDDTEDYINIMLDDKRNQLLQVSVIFNTITMIINAGIVVVGLFGMNIHIDLFDGQPRQFWATTVGTVVSCLLLFLVSIWWGKKKYLLSE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04567 425 Gene3D Magnesium transport protein CorA, transmembrane region 113 355 - -
Vivi5g04567 425 Pfam CorA-like Mg2+ transporter protein 310 418 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi5g04567 425 FunFam Magnesium transporter MRS2-E 114 355 - -
Vivi5g04567 425 CDD Mrs2_Mfm1p-like 35 420 IPR039204 -
Vivi5g04567 425 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 19 420 IPR039204 -
Vivi5g04567 425 FunFam Magnesium transporter MRS2-1 22 106 - -
Vivi5g04567 425 Gene3D - 23 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04567 Vivi-Chr5 143812981 143815067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04567 34 423 MRS2 Gene Family AT3G19640 46.154 1.63e-119 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04567 - K16075 gmx:100808805 494.197