Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04552 ATGGGAACATGGCTTTCCGGTTCATGCACCAAGAAGAACATTGAGAAACACTCTTCACCACCAAAAGTGATGTCTGTGCTTCCAAGAAGTGTCACTGATGACGTTAACTTTGATGGTGAAAGTTTTCACAATTTCTCTGAGTGTTGGATGGTTGAGCAAAACAAATATCTGGATGAACTTGTAGCAGCGAATTCAGCTCAACCTCAGCTCACAGATGATACAATGCATACCCTGATTGATAAGGTTGTTGAGCATCATGAGTATTTCTACAGAGAAAAAGCTAGGTGGGCGAAGGAAGATGTTTTGTCCATGTTTTCACCATCATGGTTAAGCTCTTTAGAAAGAGCTTTTCTTTGGATTGGTGGTTGGAGACCAAGCATGGCATTTCATTTACTGTATTCAAAATGCAGTATGCAATTTCAAGCTAGGTTGAATGACCTTATTCAAGGACAAAAAACATGTGACCTGGGAGATCTCTCGGCGTCTCAGCTCGTCAAGTTTGATGATTTGCAAAGGAGGACTATTAGAGAGGAGAGGGAAATCACTGATATGATGGCCGAGCATCAGGAAACGATTGCCGATGCCTCCATGGTCGAGTTGTCTCATGTGGTTTCTGAGATGATTGGAAGTGGAGAAAATGAGAAGGAGGAGTTGGAAGAGAGAATTGAATCAGTTCTTGAAGCTAAGCTGGAAGGTTTGGAGAAGATTCTTCATAGAGCTGATGATTTAAGGCTAAGAGCCTTGCAAGGGATTGTTAATATTCTAACTCCAAAGCAAGCTATTTACTTCTTGATTGCTGCTGCAGAGCTGCACCTGAGGCTACATGAGTGGGGTAAGAAGAAGGATGATGCCAAAAAGAGCAAACAAGGTATTAAGGAGGGTGAAAGCCATAATTCATGA 900 0.42 MGTWLSGSCTKKNIEKHSSPPKVMSVLPRSVTDDVNFDGESFHNFSECWMVEQNKYLDELVAANSAQPQLTDDTMHTLIDKVVEHHEYFYREKARWAKEDVLSMFSPSWLSSLERAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIQGQKTCDLGDLSASQLVKFDDLQRRTIREEREITDMMAEHQETIADASMVELSHVVSEMIGSGENEKEELEERIESVLEAKLEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKKSKQGIKEGESHNS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04552 299 ProSiteProfiles DOG1 domain profile. 39 284 IPR025422 GO:0006351|GO:0043565
Vivi5g04552 299 Coils Coil 208 235 - -
Vivi5g04552 299 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 40 291 - -
Vivi5g04552 299 Pfam Seed dormancy control 58 134 IPR025422 GO:0006351|GO:0043565
Vivi5g04552 299 MobiDBLite consensus disorder prediction 280 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04552 Vivi-Chr5 143612675 143614037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04552 49 274 bZIP Transcription Factor Family AT5G06950 26.840 2.93e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04552 - - cam:101504084 411.764