Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04548 ATGAAAACCCTCTCTCTTCCGCCGTTGCTTGCTCCTCCTCCTAGTGCCCTACTTGGTAGCAGAGCTTTTGCAAACACTTTAACTTTAACCACAAAGTGTTTTCCCAAGCAACTTCATTTCCACTCTCGATGCGTTGTTTTCTCTACACACTCGACTTCTGCAACTCTGTCTGTGGACTCTGAAGTAGAAAAGAAGCAAGTATTTGATGGAGACAAGGCCTCTTTGCTTGTTAGTGAGCTCAGAAAGAATTTTGATACAGGTAAGTCTAAGAGTTATGAATGGCGAATTTCCCAATTGGAATCCATAGCTAAGATGTTGGTAGAGAAAGAGGAGGAAATTATTGATGCTCTTGTTAAGGACCTTTCTAAACCTAGAATGGAAGCATATATAACCGAGATTTTCCAGGTGAAAACTTCGTGTAATGAAACACTTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTTTCAGAACCATTGGGAGTTGTGTTGATCATATCAACATGGAACTTTCCTTTCTCATTATCATTGGATCCGATCATTGGAGCCATTGCAGCAGGCAACACAGTGGTTTTGAAACCATCAGAAATTTCTCCTGCAACATCATCCCTTCTTGCAAGTTTGTTAGAAAGTTATCTAGACAATTCTGCTGTAAGAGTTGTTGAAGGTGCTGTTCCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAGTGCCCGAGTAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCAGCTGTTGTTGATTCAAATATCAATTTACAAGTCACTGCTAGGAGGATAGTAGCTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTACATCATCACAAGAAAAGACTTTGCTCCAACACTTATAACTGCTTTAAAAGATGGGCTGGAAGAATTTTTTGGGAAAGATCCAATCGAATCCAAAGACATGTCTCGTATTGTGTCTCCTACTCAATTTGCACGACTTGTGAGACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTTTAGGAGGTCAGAGAGATGAGAAGAAATTGAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTACCAATCATTACTGTAGACAATATAGAAGATAGCTTCAGTATAATAAAATCAAGGCCAAAACCTCTCGCAGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTCGATAAGATATCTTCTGGAGGAATGCTCATCAATGATGCTGTTGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGGAGAAAGTGGAATGGGCGCTTACCATGGAAAGTTCTCTTTCGATAGTTTCAGCCATAAGAAGGCAGTTTTATATAAAGGTTTTGATTCAGATCCATCCATAAGGTATCCACCATACACGCCTGAGAAGGCGAAATTGTTGAGGGCCATTTTAGATGGTAGTATTTTTCACATTATTCTTGCTTTGCTTGGATGGTCTAAATGA 1641 0.404 MKTLSLPPLLAPPPSALLGSRAFANTLTLTTKCFPKQLHFHSRCVVFSTHSTSATLSVDSEVEKKQVFDGDKASLLVSELRKNFDTGKSKSYEWRISQLESIAKMLVEKEEEIIDALVKDLSKPRMEAYITEIFQVKTSCNETLQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPFSLSLDPIIGAIAAGNTVVLKPSEISPATSSLLASLLESYLDNSAVRVVEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIVAGKWACNSGQACISVDYIITRKDFAPTLITALKDGLEEFFGKDPIESKDMSRIVSPTQFARLVRLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVDNIEDSFSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVGESGMGAYHGKFSFDSFSHKKAVLYKGFDSDPSIRYPPYTPEKAKLLRAILDGSIFHIILALLGWSK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04548 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 282 482 IPR016163 GO:0016620
Vivi5g04548 546 Pfam Aldehyde dehydrogenase family 74 502 IPR015590 GO:0016491
Vivi5g04548 546 PANTHER ALDEHYDE DEHYDROGENASE 73 537 IPR012394 GO:0006081
Vivi5g04548 546 FunFam Aldehyde dehydrogenase 282 482 - -
Vivi5g04548 546 PIRSF ALDH 52 541 IPR012394 GO:0006081
Vivi5g04548 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 500 IPR016162 GO:0016491
Vivi5g04548 546 SUPERFAMILY ALDH-like 77 518 IPR016161 GO:0016491
Vivi5g04548 546 FunFam Aldehyde dehydrogenase 81 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04548 Vivi-Chr5 143584262 143588313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04548 30 546 Aldehyde Dehydrogenase Gene Family AT4G34240 63.198 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04548 K00128 - gmx:100800699 846.654