Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04547 ATGAAAACCCTCTCTCTTCCGCCGTTGCTTGCTCCTCCTCCTAGTGCCCTACTTGGTAGCAGAGCTTTTGCAAACACTTTAACTTTAACCACAAAGTGTTTTCCCAAGCAACTTCATTTCCACTCTCGATGCGTTGTTTTCTCTACACACTCGACTTCTGCAACTCTGTCTGTGGACTCTGAAGTAGAAAAGAAGCAAGTATTTGATGGAGACAAGGCCTCTTTGCTTGTTAGTGAGCTCAGAAAGAATTTTGATACAGGTAAGTCTAAGAGTTATGAATGGCGAATTTCCCAATTGGAATCCATAGCTAAGATGTTGGTAGAGAAAGAGGAGGAAATTATTGATGCTCTTGTTAAGGACCTTTCTAAACCTAGAATGGAAGCATATATAACCGAGATTTTCCAGGTGAAAACTTCGTGTAATGAAACACTTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTTTCAGAACCATTGGGAGTTGTGTTGATCATATCAACATGGAACTTTCCTTTCTCATTATCATTGGATCCGATCATTGGAGCCATTGCAGCAGGCAACACAGTGGTTTTGAAACCATCAGAAATTTCTCCTGCAACATCATCCCTTCTTGCAAGTTTGTTAGAAAGTTATCTAGACAATTCTGCTGTAAGAGTTGTTGAAGGTGCTGTTCCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCAGCTGTTGTTGATTCAAATATCAATTTACAAGTCACTGCTAGGAGGATAGTAGCTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTACATCATCACAAGAAAAGACTTTGCTCCAACACTTATAACTGCTTTAAAAGATGGGCTGGAAGAATTTTTTGGGAAAGATCCAATCGAATCCAAAGACATGTCTCGTATTGTGTCTCCTACTCAATTTGCACGACTTGTGAGACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTTTAGGAGGTCAGAGAGATGAGAAGAAATTGAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTACCAATCATTACTGTAGACAATATAGAAGATAGCTTCAGTATAATAAAATCAAGGCCAAAACCTCTCGCAGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTCGATAAGATATCTTCTGGAGGAATGCTCATCAATGATGCTGTTGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGGAGAAAGTGGAATGGGCGCTTACCATGGAAAGTTCTCTTTCGATAGTTTCAGCCATAAGAAGGCAGTTTTATATAAAGGTTTTGATTCAGATCCATCCATAAGGTATCCACCATACACGCCTGAGAAGGCGAAATTGTTGAGGGCCATTTTAGATGGTAGTATTTTTCACATTATTCTTGCTTTGCTTGGATGGTCTAAATGA 1626 0.4022 MKTLSLPPLLAPPPSALLGSRAFANTLTLTTKCFPKQLHFHSRCVVFSTHSTSATLSVDSEVEKKQVFDGDKASLLVSELRKNFDTGKSKSYEWRISQLESIAKMLVEKEEEIIDALVKDLSKPRMEAYITEIFQVKTSCNETLQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPFSLSLDPIIGAIAAGNTVVLKPSEISPATSSLLASLLESYLDNSAVRVVEGAVPETTALLEQKWDKILYTGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIVAGKWACNSGQACISVDYIITRKDFAPTLITALKDGLEEFFGKDPIESKDMSRIVSPTQFARLVRLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVDNIEDSFSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVGESGMGAYHGKFSFDSFSHKKAVLYKGFDSDPSIRYPPYTPEKAKLLRAILDGSIFHIILALLGWSK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04547 541 PIRSF ALDH 52 536 IPR012394 GO:0006081
Vivi5g04547 541 FunFam Aldehyde dehydrogenase 277 477 - -
Vivi5g04547 541 SUPERFAMILY ALDH-like 77 513 IPR016161 GO:0016491
Vivi5g04547 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 277 477 IPR016163 GO:0016620
Vivi5g04547 541 Pfam Aldehyde dehydrogenase family 74 497 IPR015590 GO:0016491
Vivi5g04547 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 495 IPR016162 GO:0016491
Vivi5g04547 541 FunFam Aldehyde dehydrogenase 81 280 - -
Vivi5g04547 541 PANTHER ALDEHYDE DEHYDROGENASE 73 532 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04547 Vivi-Chr5 143584258 143588314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04547 30 541 Aldehyde Dehydrogenase Gene Family AT4G34240 61.657 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04547 K00128 - gmx:100800699 831.632