Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04543 ATGGAACAAGCTCAGAAACCTACTGAAGTGAAAGAGAAACAGCCTCCTAAAGGAAGAAAGTTAAGAGAAAGATCTAAGATAAATGTCAGGACATTTAGTTCAGTTCTTTCAGCTAGAAGCAAGGCTGTTGGTAGAAATGTGCCAAATGATATGGTAATGAACATTGATGCAACTGACAAGGATAGTGAATTGGCTGCAACTGAGTACATTGATGATATTTATAAGTTTTACAAACTCAGCGAAGATGACTGTCCTGTACATGATTACATGGTTTCTCAGCCTGATATAAATGCCAAGATGAGAGCGATTCTTGTTGATTGGAAGGAAGTTTGGTTTACATTCCCTAGGCAAGATGAAGCAGTAAAATTTGCCAAAGAACAAGAAGATGTTCATCTCTTTAGTTACCAAGATCACTTTAATGGCCAGAGAAGGTTCCTTGTGTCTACTTATACAGAATTCTGGCGAAGGTCTCCAACTTTGAGACTTATGGAGCACACTGTTGCTGTGAAGGCCATTGCTTGGTCGCCTCACCAGATCAACGGAGACTATGCAAATGACTATAACATATCAGCCAATGGTTCATTTTCTGTTGAGTTTCTGTTTAGCAGTATAGACAGCATGGAATTGGTTTGTTATATCTATTTTTGTTTTTCTGCTCAAGGTTGTTTGGTAGCGTAG 678 0.3879 MEQAQKPTEVKEKQPPKGRKLRERSKINVRTFSSVLSARSKAVGRNVPNDMVMNIDATDKDSELAATEYIDDIYKFYKLSEDDCPVHDYMVSQPDINAKMRAILVDWKEVWFTFPRQDEAVKFAKEQEDVHLFSYQDHFNGQRRFLVSTYTEFWRRSPTLRLMEHTVAVKAIAWSPHQINGDYANDYNISANGSFSVEFLFSSIDSMELVCYIYFCFSAQGCLVA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04543 225 MobiDBLite consensus disorder prediction 1 23 - -
Vivi5g04543 225 PANTHER DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN 84 166 IPR044917 GO:0003887|GO:0003896|GO:0042276
Vivi5g04543 225 SUPERFAMILY Cyclin-like 62 107 IPR036915 -
Vivi5g04543 225 Gene3D - 86 107 - -
Vivi5g04543 225 Gene3D - 72 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04543 Vivi-Chr5 143563093 143565129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04543 7 107 Core Cell Cycle Gene Families AT2G26760 44.554 1.06e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04543 K21777 - gmx:547782 130.954