Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04515 ATGGGAACATGGCTTTCCGGTTCATGCACCAAGAAGAACATTGAGAAACACTCTTCACCACCAAAAGTGATGTCTGTGCTTCCAAGAAGTGTCACTGATGACGTTAACTTTGATGGTGAAAGTTTTCACAATTTCTCTGAGTGTTGGATGGTTGAGCAAAACAAATATCTGGATGAACTTGTAGCTGCGAATTCAGCTCAACCTCAGCTCACAGATGATACAATGCATACCCTGATTGATAAGGTTGTTGAGCATCATGAGTATTTCTACAGAGAAAAAGCTAGGTGGGCGAAGGAAGATGTTTTGTCCATGTTTTCACCATCATGGTTAAGCTCTTTAGAAAGAGCTTTTCTTTGGATTGGTGGTTGGAGACCAAGCATGGCATTTCATTTACTGTATTCAAAATGCAGTATGCAATTTCAAGCTAGGTTGAATGACCTTATTCTAGGACAAAAAACATGTGACCTGGGAGATCTTTCCGCGTCTCAGCTCGCCAAGTTTGATGACTTGCAGAGGAGGACTATTAGAGAGGAGAGGGAAATCACTGATATGATGGCCGAGCATCAGGAAACGATTGCCGATGCTTCCATGGTCGAGTTGTCTCATGTGGTTTCTGAGATGATTGGAAGTGGAGAAAATGAGAAGGAGGAGTTGGAAGAGAGAATTGAATCAGTTCTTGAAGCTAAGCTGGAAGGTTTGGAGAAGATTCTTCATAGAGCTGATGATTTAAGGCTAAGAGCCTTGCAAGGGATTGTTAATATTCTAACTCCAAAGCAAGCTATTTACTTCTTGATTGCTGCTGCAGAGCTGCACCTGAGGCTACATGAGTGGGGTAAGAAGAAGGATGATGCCAAAAAGAGCAAACAAGGTATTAAGGAGGGTGAAAGCCATAATTCATGA 900 0.4211 MGTWLSGSCTKKNIEKHSSPPKVMSVLPRSVTDDVNFDGESFHNFSECWMVEQNKYLDELVAANSAQPQLTDDTMHTLIDKVVEHHEYFYREKARWAKEDVLSMFSPSWLSSLERAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLILGQKTCDLGDLSASQLAKFDDLQRRTIREEREITDMMAEHQETIADASMVELSHVVSEMIGSGENEKEELEERIESVLEAKLEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKKSKQGIKEGESHNS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04515 299 Pfam Seed dormancy control 58 134 IPR025422 GO:0006351|GO:0043565
Vivi5g04515 299 Coils Coil 208 235 - -
Vivi5g04515 299 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g04515 299 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 40 291 - -
Vivi5g04515 299 ProSiteProfiles DOG1 domain profile. 39 284 IPR025422 GO:0006351|GO:0043565
Vivi5g04515 299 MobiDBLite consensus disorder prediction 280 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04515 Vivi-Chr5 143144704 143146063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04515 49 274 bZIP Transcription Factor Family AT5G06950 26.840 6.67e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04515 - - cam:101504084 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04515 5 143144704 143146063 Vivi5g04515 5 143144704 143146063 ECH