Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04511 ATGAAAACCCTCTCTCTTCCGCCGTTGCTTACTCCTACTCCTAGTGCCCTACTTGGTAGCAGAGCTTTTGCAAACACTTTAACTTTAACCACAAAGTGTTTTCCCAAGCAACTTCATTTCCACTCTCGCTGTGTTGTTTTCTCTACCCACTCGACTTCTGCAACTCTATCTGTGGAATCAGAAGTAGAGAAGAAGCAAGTATTTGATGGAGACAAGGCCTCTTTGCTTGTTAGTGAGCTCAGAAAGAATTTTGATACAGGTAAGTCTAAGAGTTATGAATGGCGAATTTCCCAATTGGAATCCATAGCTAAGATGTTGGTAGAGAAAGAGGAGGAAATTATTGATGCTCTTGTTAAGGACCTTTCTAAACCTAGAATGGAAGCATATATAACCGAGATTTTCCAGGCGAAAACTTCGTGTAATGAAACACTTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCCGCAGAGATTGTTTCAGAACCATTAGGAGTTGTATTGATCATATCAACATGGAACTTTCCTTTCTCATTATCATTGGATCCGATCATTGGAGCCATTGCAGCAGGCAACACAGTGGTTTTGAAACCATCTGAAATTTCTCCTGCAACATCATCCCTGCTTGCTAATTTGCTAGAAACTTATTTAGACAATTCTGCAGTAAGAGTTGTTGAAGGCGCTGTTCCTGAAACAACTGCCCTCTTGGAACAGAAGTGGGATAAGATACTTTATACAGGTAGTGCCCGAGTAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCAGCTGTTGTTGATTCAAATATCAACTTACAAGTCACTGCTAGGAGGATAATAGCTGGTAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTACATCATCACAAGAAAAGACTTTGCTCCAACACTTATAACTGCTTTAAAAGATGGGCTGGAAGAATTTTTTGGGAAAGATCCAATCGAATCCAAAGACATGTCTCGTATTGTGTCTCCTACTCAATTTGCACGACTTGTGAGACTCTTGGATGATGATAAGGCATCTGACAAAATTGTTTTAGGAGGTCAGAGAGATGAGAAGAAATCAAAGATTGCTCCAACTATATTATTAGATGTTCCAGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTACCAATTATTACTGTAGACAATATAGAAGATAGCTTCAGTATAATAAAATCAAGGCCAAAACCTCTCGCAGCATATCTCTTCACGAACAATGAGCAGCTGAAGAAGGATTATGTCGATAAGATATCTTCCGGAGGAATGCTCATCAATGATGCTGTTGTGCATGTTGCAACTCGGGGTTTGCCTTTTGGAGGAGTTGGAGAAAGTGGAATGGGCGCTTACCATGGAAAGTTCTCTTTCGATAGTTTCAGCCATAAGAAGGCAGTTTTATATAAAGGTTTTGATTCAGATCCATCCATAAGATATCCACCATACACGCCTGAGAAGGCGAAATTGTTGAGGGCCATTTTAGATGGTAGTATTTTTCACATAATTCTTGCTTTGCTTGGATGGTCTAAATGA 1641 0.4016 MKTLSLPPLLTPTPSALLGSRAFANTLTLTTKCFPKQLHFHSRCVVFSTHSTSATLSVESEVEKKQVFDGDKASLLVSELRKNFDTGKSKSYEWRISQLESIAKMLVEKEEEIIDALVKDLSKPRMEAYITEIFQAKTSCNETLQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPFSLSLDPIIGAIAAGNTVVLKPSEISPATSSLLANLLETYLDNSAVRVVEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITRKDFAPTLITALKDGLEEFFGKDPIESKDMSRIVSPTQFARLVRLLDDDKASDKIVLGGQRDEKKSKIAPTILLDVPEEAMVMQEEIFGPILPIITVDNIEDSFSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVGESGMGAYHGKFSFDSFSHKKAVLYKGFDSDPSIRYPPYTPEKAKLLRAILDGSIFHIILALLGWSK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04511 546 SUPERFAMILY ALDH-like 77 518 IPR016161 GO:0016491
Vivi5g04511 546 PIRSF ALDH 52 541 IPR012394 GO:0006081
Vivi5g04511 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 500 IPR016162 GO:0016491
Vivi5g04511 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 282 482 IPR016163 GO:0016620
Vivi5g04511 546 Pfam Aldehyde dehydrogenase family 73 502 IPR015590 GO:0016491
Vivi5g04511 546 FunFam Aldehyde dehydrogenase 282 482 - -
Vivi5g04511 546 PANTHER ALDEHYDE DEHYDROGENASE 73 537 IPR012394 GO:0006081
Vivi5g04511 546 FunFam Aldehyde dehydrogenase 81 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04511 Vivi-Chr5 143119095 143123117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04511 30 546 Aldehyde Dehydrogenase Gene Family AT4G34240 62.863 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04511 K00128 - gmx:100800699 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04511 5 143119095 143123117 Vivi5g04511 5 143119095 143123117 ECH