Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04479 ATGGCAATTTTAAAGAACTTAACCGTAGATGAAATGGTGTGCTATTCACCAACTATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGGATTATGCTCTTCCTCTCTTCATCCTTCAAGTTATTTTAGTTGTTGTTGCCACGCGAATCTTCGTCTTCGTACTCAAGCCTATTCGCCAACCACGCGTCATAGCAGAAATCTTGGGAGGGATAGTGTTAGGTCCTTCTGTTCTTGGAAGAAACAAAACATTTGCTGATGCAGTTTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCGAATGTTGGTCTTTTATATTTTCTATTCTTGGTTGGAGTAGGGATGGATGCATCTGCAATAAGAAGAATGGGTAGAAAATCACTCACCATAGCAGTTTCTGGTATGGTGTTACCATTCGGAACGGGAGCGCTATTTTCGATCTTTTTGATGAAAGACGGTGAGAAAGCCACAAATGGAAGTGCTTTTGTGTTAATTCTCGGCGTTGTTCTTTCTGTCACTGCATTTCCTGTTCTTGCTAGGATCCTTGCAGAGTTAAAACTGATCAACTCAGAGTTGGGAAGGGTTGCTCTTTCAGCTGCAATCATCAATGATGTTCTGTCATGGATGCTTCTGGCTATAGCCATTGCTTTGGCAGAAGATGAGAGAATTTCTGTGGCTTCTGTAATGGTTGTTTTGTCAAGTGCTGCATTTGTCGCCTTTAATGCTTTTGTCGTACGGCCGATAATCATGTGGATAATAAGGAAAACGCCAGAAGGCGAATCGTTTAGCGATTTCTATATATGTTTGATACTAGCAGGTGTGATGATATCAGGTTTCATCACAGATGCTATTGGAACTCATTCTGTTTTCGGTGCTTTTGTATTCGGTTTGATTATTCCAACCGGTCCACTTGGTTTCGCTCTTATTGAAAAGCTTGAGGACTTTGTTTCGGGCCTTTTGCTTCCTCTCTTTTTCGCAATTAGTGGATTGAAGACTAATGTTGGTCTCATCACTGGTGTTACTAAATGGGCCGTTATAATCATTCTTGTTGTTTTGTCTTGTATCGGTAAAGTCGTTGGAACTTTGATTGTTTCTATTAGCTATCAAATGTCACTTTCTGAAGGTGCTGCTCTTGGCATGCTCATGAACACGAAAGGCCTAGTTGAAATTCTTGTTCTTAACATCGGTCGAGATCAAAAGGTTTTGGACGAGGAAGCGTTTGCGACAATGGTGGTTATAACAGTACTAATGACTGGAATGATTGTGCCTGCAATATCAATTATATATAGACCATCAAGAGGGATGATATCTTACAAAAGAAGAACGATTCAAATGTCGAAAAAAGATGCAGAGTTTAGAGTACTAGTGTGTATTCATACCCCAAGAAATGTTCCAACTATGATAAACCTACTTGAAGCCTCAAATCCAACAAAGAAATCACCAATATGTATCTATGTGCTCCATTTGGTTGAGCTCACGGGTCGAACATCGGCGTTACTCATTGTTCATACATCGAAAAAATCAGATCATACTGCTCTCAACAGAACCGAAGCTCAATCCGATCATATAATCAACGCCTTTGATAACTACGAACAGCACGCAGAACATGTATCAGTCCAACCGTTAACAGCAATCTCCCCTTACTCCACAATGCATGAAGATATATGCAGTTTAGCTGAGGAAAAACGCGTCGCGTTTATAATCATCCCTTTTCATAAACAACAAACAGTCGACGGAGGAATGGAGGCAACAAACATGGCGTTTCGTACAGTTAACCAAAATGTGTTAGCGAATTCGCCTTGTTCAGTTGGAATTCTAGTAGATAGAGGCTTAAACAGTTCAAACCGTTTAGTTGCCGATCAAATGTCACATCATGTAGCAGTTTTGTTTTTCGGAGGACCAGACGATAGAGAAGCGTTAAGTTACGGTTGGAGAATGTCGGAACATTCAGGAATAAGCCTAACCGTTATGCGTTTTGTTGCTGGAGAAGACACGGCGATGAGCGAAAGCAGTACTAGTCATAACAACAATGCAGATAAACAAAGAGTTCTAACCGTTGAAACAGACGAAGACGGAGAAACTGATAAACAACTCGACGAGAGATTCTTACATTGGTTCATGATGAGTCATGTAAACGATGACTCAATTGCGTATATCGAAAAAGTAGTTAACAACGGGGAGGAAACGGTTGCGGCGATAAGGTCAATGGGAGATGTTTTTGGACTATTTATAGTTGGAAGAGGACAAGGAGTTATATCCCCACTGACTGCAGGACTTACTGATTGGAGTGAATGTCCTGAGTTAGGTGCAATTGGTGATTTGTTAGCATCTTCTGATTTTGCAACAGTTGCATCAGTTTTGGTGGTTCAACAATATGTTGGTGCTGGTTTAGAAGATGGATTGGGAACACCTGTGTTAAATGAAGAATATGGTGGTGGTGGAAATCAATCAAATTTCATGCAACCAAGGGGGAGTCAAACTGTTACTTCACCAAGGGGGCATCAATCTGTTTTTAGTACAGAAAGGTGTTGA 2541 0.4065 MAILKNLTVDEMVCYSPTMITTNGIWQGDNPLDYALPLFILQVILVVVATRIFVFVLKPIRQPRVIAEILGGIVLGPSVLGRNKTFADAVFPLRSVMVIETMANVGLLYFLFLVGVGMDASAIRRMGRKSLTIAVSGMVLPFGTGALFSIFLMKDGEKATNGSAFVLILGVVLSVTAFPVLARILAELKLINSELGRVALSAAIINDVLSWMLLAIAIALAEDERISVASVMVVLSSAAFVAFNAFVVRPIIMWIIRKTPEGESFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLIIPTGPLGFALIEKLEDFVSGLLLPLFFAISGLKTNVGLITGVTKWAVIIILVVLSCIGKVVGTLIVSISYQMSLSEGAALGMLMNTKGLVEILVLNIGRDQKVLDEEAFATMVVITVLMTGMIVPAISIIYRPSRGMISYKRRTIQMSKKDAEFRVLVCIHTPRNVPTMINLLEASNPTKKSPICIYVLHLVELTGRTSALLIVHTSKKSDHTALNRTEAQSDHIINAFDNYEQHAEHVSVQPLTAISPYSTMHEDICSLAEEKRVAFIIIPFHKQQTVDGGMEATNMAFRTVNQNVLANSPCSVGILVDRGLNSSNRLVADQMSHHVAVLFFGGPDDREALSYGWRMSEHSGISLTVMRFVAGEDTAMSESSTSHNNNADKQRVLTVETDEDGETDKQLDERFLHWFMMSHVNDDSIAYIEKVVNNGEETVAAIRSMGDVFGLFIVGRGQGVISPLTAGLTDWSECPELGAIGDLLASSDFATVASVLVVQQYVGAGLEDGLGTPVLNEEYGGGGNQSNFMQPRGSQTVTSPRGHQSVFSTERC 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04479 846 MobiDBLite consensus disorder prediction 809 846 - -
Vivi5g04479 846 Pfam Sodium/hydrogen exchanger family 44 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi5g04479 846 PANTHER CATION/H + ANTIPORTER 13 796 - -
Vivi5g04479 846 FunFam Cation/H(+) antiporter 15 38 439 - -
Vivi5g04479 846 Gene3D - 38 436 IPR038770 -
Vivi5g04479 846 MobiDBLite consensus disorder prediction 813 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04479 Vivi-Chr5 142744173 142747449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04479 12 807 Antiporter Super Family AT2G13620 67.503 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04479 K26731 - twl:120012487 1125.92