Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04384 ATGAGAAGAGACAATCCTTATATGATTGTGATAATCATACAAGCCATATATGCAGCAATGTTTCTTCTGTCAAAAGCTGCATTCGACCACGGCATGAACAACTTCATCTTTGTCTTCTACAGACAGTCTGCAGCAACAATTTTCCTAACACCTTTTGCTCTCTTCTTTGAATGGAAAACTGCACCGCCTTTACCATTCAAAACCTTTTGCCAGATCTTCTTCCTTTCTTTCATTGGGATAACTTTGAGCTTAAACATATATGGTATTGCTTTGATAAATACTTCTGCAACTTTGGCTGCTGCTACTACTAACTGTCTTCCAGTTATTACCTTCTTCTTGGCACTCCTATTCAGAATCGAAGTTTTGAGAGTAAAAACAGCTGCTGGGGCAGCTAAGTTGGCTGGTGTTGTGGCATGTTTGGGTGGAGCAGCAACTCTTGCTTTTTATAAAGGACCTCATTTAGAACTTTTAAGTCATTTTCACTTTTTGGGGAATTACCATAAAACCCAACTACATCAGGGCCATCTTCTATCTGGCTCATCATGGATCAAGGGTTGTTTCCTCATGCTTCTTTCTAATACCTTTTGGGGAATGTGGCTTGTTCTACAAACGTTTATCGTAAAAGGATATCCTTCAAAGCTGCTACTCACGACTCTTCAGTGTTTTTTAAGTTCAATCCAGTCTTTGGTCGTAGCGTTGGCCATAGAACGAGACATTGAACAATGGAAATTGGGTTGGAATGTCAGACTCGTCGCTGTGTTATATTGTGGAATTATGGTGACTGGTGTGACATATTACTTACAAACATGGGTTATAGAGAAGAGAGGACCAGTGTTTCTAGCCATGTCAACACCGCTAGCTTTGATCATGACTATGTTCTCCTCAGCAATTCTCTTGGGAGAGATAATAAGTTTGGGAAGCCTTTTAGGTAGCTGTGCTTTGGTTTTAGGACTGTACTGTGTGTTGTGGGGAAAGAGCAGAGAGCAAATGCCGAAAGCTTCCTTGGACATGGAGCAAGCTTCGAGTTTGAATGAACCAAATAAGTGA 1047 0.4069 MRRDNPYMIVIIIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQSAATIFLTPFALFFEWKTAPPLPFKTFCQIFFLSFIGITLSLNIYGIALINTSATLAAATTNCLPVITFFLALLFRIEVLRVKTAAGAAKLAGVVACLGGAATLAFYKGPHLELLSHFHFLGNYHKTQLHQGHLLSGSSWIKGCFLMLLSNTFWGMWLVLQTFIVKGYPSKLLLTTLQCFLSSIQSLVVALAIERDIEQWKLGWNVRLVAVLYCGIMVTGVTYYLQTWVIEKRGPVFLAMSTPLALIMTMFSSAILLGEIISLGSLLGSCALVLGLYCVLWGKSREQMPKASLDMEQASSLNEPNK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04384 348 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Vivi5g04384 348 Pfam EamA-like transporter family 7 131 IPR000620 GO:0016020
Vivi5g04384 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 147 - -
Vivi5g04384 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Vivi5g04384 348 PANTHER WAT1-RELATED PROTEIN 6 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04384 Vivi-Chr5 141477142 141479538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04384 1 256 Nodulin-like Gene Family AT5G64700 61.004 5.90e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04384 - - gmx:100804562 514.227