Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04383 ATGTGCATTGATTCTACTTGGTGCGTTGCATCTTTACTTCTTCCATCTTTCAACGTATATTCTCATTCTCACACCTTTAATACCACATTACTTTCCAACACAAAACAAAACGCCCGAACAGAGTACAACAATAGAATACAAGAAATGGCGAAATCACCTGAAACCGAACTTCCGATCAAAGCTCTTGGCTGGGCTGCTACTGACACTTCTGGCATTCTCTCTCCATTCCAATTCTCCAGAAGGGAAAATGGAGAAGATGATGTTGCGATCAAGATTCTGTTTTGTGGCGTTTGTCATTCTGATTTGCACACTATCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCCGGGCATGAGATTGTTGGCATTGTGACAAAAGTGGGAAACAATGTGAAAAAATTCCGTGTGGGGGATAAAGTTGGTGTTGGTGTAATGGTGGAATCTTGTCAAACTTGTGAGAATTGCCAGCAGGATCTAGAGAATCACTGTCCTAAAACTGTGTATACCTATAACTCTCCTTATAAAGGAACAAGAACCCAGGGAGGCTATTCTGATTCAGTGGTTGTTCACCAGCGCTATGTACTCCAGTTTCCGGACAACTTACCCCTTGATGCTGGTGCTCCACTATTGTGTGCTGGGATCACCGTGTATAGCCCGATGATATATTATGGCATGACTCAGCCAGGCAAACATTTGGGAGTGGCTGGGCTTGGTGGGTTAGGTCATGTTGCAATCAAAATTGGCAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCTCCCGACAAGGAAAGAGAGGCCATTGACAAACTTGGTGCTGATGCTTTCCTTGTTTCCAGTGATTCAGAAAAACTGAAGGCTGCTAGGGGAACCATAGATTATATCATAGACACAATTTCTGCTGTTCATCCCCTGTTGCCACTGCTTGGCCTGTTGAAGCTGAATGGAAAACTGATCAATGTGGGGTTGCCTAGCAAGCCCCTTGAGCTCCCCGTCTTTCCATTAGTTGGAGGACGTAAGTTTATAGGAGGGAGCAACTTCGGCGGGATCAAGGAGACTCAGGAGATGCTAGATTTCTGCGCCAAGCACAACATAACTGCTGATATTGAGCTGATTAGGATGGACCAAATCAACACAGCAATGGAAAGGCTTAGCAAAGCTGATGTCAAATATCGATTTGTGATCGATGTGGCCAACTCTTTCTCAAGTTTGTAG 1224 0.4436 MCIDSTWCVASLLLPSFNVYSHSHTFNTTLLSNTKQNARTEYNNRIQEMAKSPETELPIKALGWAATDTSGILSPFQFSRRENGEDDVAIKILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIVGIVTKVGNNVKKFRVGDKVGVGVMVESCQTCENCQQDLENHCPKTVYTYNSPYKGTRTQGGYSDSVVVHQRYVLQFPDNLPLDAGAPLLCAGITVYSPMIYYGMTQPGKHLGVAGLGGLGHVAIKIGKAFGLKVTVISTSPDKEREAIDKLGADAFLVSSDSEKLKAARGTIDYIIDTISAVHPLLPLLGLLKLNGKLINVGLPSKPLELPVFPLVGGRKFIGGSNFGGIKETQEMLDFCAKHNITADIELIRMDQINTAMERLSKADVKYRFVIDVANSFSSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04383 407 SMART PKS_ER_names_mod 71 398 IPR020843 GO:0016491
Vivi5g04383 407 Pfam Alcohol dehydrogenase GroES-like domain 86 198 IPR013154 -
Vivi5g04383 407 FunFam probable cinnamyl alcohol dehydrogenase 64 228 - -
Vivi5g04383 407 SUPERFAMILY GroES-like 68 232 IPR011032 -
Vivi5g04383 407 Pfam Zinc-binding dehydrogenase 241 364 IPR013149 -
Vivi5g04383 407 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 119 133 IPR002328 GO:0008270|GO:0016491
Vivi5g04383 407 CDD CAD1 63 399 IPR047109 GO:0016616
Vivi5g04383 407 Gene3D - 64 400 - -
Vivi5g04383 407 PANTHER ALDEHYDE REDUCTASE 53 403 IPR047109 GO:0016616
Vivi5g04383 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 203 368 IPR036291 -
Vivi5g04383 407 Gene3D - 214 370 - -
Vivi5g04383 407 FunFam Putative cinnamyl alcohol dehydrogenase 6 371 400 - -
Vivi5g04383 407 FunFam Cinnamyl alcohol dehydrogenase 214 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04383 Vivi-Chr5 141449969 141453008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04383 60 404 Monolignol Biosynthesis Gene Families AT2G21730 71.264 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04383 K00083 - gmx:100819684 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04383 5 141449969 141453008 Vivi5g04383 5 141449969 141453008 ECH