Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04382 ATGGCGAACTCACCCGAAACCCAACTTCCAATCAAAGCTTTTGGCTGGGCTGCTACCGACACTTCTGGCATACTCTCTCCATTCCATTTCTCCAGAAGGGAAAATGGAGAAGATGATGTTGCGATCAAGATTCTGTTTTGTGGCGTTTGTCATTCTGATTTGCACACTCTCAAGAATGATTGGGGTTTCACTACTTACCCTGTTGTTCCCGGGCATGAGATTGTTGGCATTGTGACAAAAGTTGGAAACAATGTGAAAAATTTCCGTGCGGGGGATAAAGTTGGTGTTGGTGTAATGGTGGAATCTTGTCAAACTTGTGAGAATTGCCAGCAGGATCTAGAGAATCACTGTCCTAAAATTGTGTTCACCTATAACTCTCCTTATAAAGGGACAACTACCCTGGGGGGTTATTCTGATTCCGTGGTTGTTCACCAGCGGTATGTACTCCAGTTTCCGGACAACTTACCCCTTGATGCTGGTGCTCCGCTATTGTGTGCTGGGATCACCGTGTATAGTCCGATGATATATTATGGCATGACTCAGCCAGGCAAACATTTGGGAGTGGCTGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGGCAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCTCCTGACAAGGAAAGAGAGGCCATTGACAATCTTGGTGCTGATGCTTTCCTTGTTTCCAGTGATTCTGAAAAACTGAAGGCTGCTACGGGAACCATGGATTATATCATAGACACAATTTCTGCTGCTCATCCTCTGTTGCCACTGCTTGGCCTGTTGAAGCTGAATGGGAAACTGGTCCTTGTGGGGTTGCCTAGCAAGCCCCTTGACCTCCCTGTCTTTCCATTAGTTGGAGGACGTAAACTTATAGGAGGGAGCAACTTCGGAGGGATCAAGGAGACTCAGGAGATGCTAGATTTCTGCGCCAAGCACAACATAACTGCTGATATTGAGCTGATTAGGATGGACCAAATCAACACAGCAATGGAAAGGCTTAGCAAAGCTGATGTCAAATATCGCTTTGTGATTGATGTGGCCAACTCTTTCTCTAGTTTGTAG 1080 0.4593 MANSPETQLPIKAFGWAATDTSGILSPFHFSRRENGEDDVAIKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGIVTKVGNNVKNFRAGDKVGVGVMVESCQTCENCQQDLENHCPKIVFTYNSPYKGTTTLGGYSDSVVVHQRYVLQFPDNLPLDAGAPLLCAGITVYSPMIYYGMTQPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPDKEREAIDNLGADAFLVSSDSEKLKAATGTMDYIIDTISAAHPLLPLLGLLKLNGKLVLVGLPSKPLDLPVFPLVGGRKLIGGSNFGGIKETQEMLDFCAKHNITADIELIRMDQINTAMERLSKADVKYRFVIDVANSFSSL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04382 359 SUPERFAMILY GroES-like 20 184 IPR011032 -
Vivi5g04382 359 PANTHER ALDEHYDE REDUCTASE 6 355 IPR047109 GO:0016616
Vivi5g04382 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Vivi5g04382 359 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Vivi5g04382 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Vivi5g04382 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vivi5g04382 359 FunFam probable cinnamyl alcohol dehydrogenase 16 180 - -
Vivi5g04382 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Vivi5g04382 359 Gene3D - 166 322 - -
Vivi5g04382 359 CDD CAD1 14 351 IPR047109 GO:0016616
Vivi5g04382 359 FunFam Cinnamyl alcohol dehydrogenase 166 322 - -
Vivi5g04382 359 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Vivi5g04382 359 Gene3D - 16 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04382 Vivi-Chr5 141441299 141444257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04382 12 356 Monolignol Biosynthesis Gene Families AT2G21730 71.839 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04382 K00083 - gmx:100819684 603.594