Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04350 ATGGCTCCTCTTACACTCTCCGTTAAGCCGCAAGACTCTTCCATTTCAGATGCGTCTACTAAGAGAAAGCAGAACTTGAATGTGAGAAATTGTTTTGCATCTGTTACCGTGGGACAGGAAAATCCATTTGACTTCTTACGCACTTTGATTGAGGGTGTTATTGCAGGTGGTACAGCCGGTGTTGTTGTTGAAACAGCTTTATACCCCATTGACACTATAAAAACACGTCTGCAGGCTGCCCGTGGAGGAGAAAAACTAGTATTAAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTGTAAAGCAGAAATTGCTAAGGATGTTTCCTGAAAATCTGAGTGCTTTTGCTCATTTAACTGCAGGTGCTATAGGGGGCATTGCTGCATCTTTTGTTCGCGTTCCAACAGAGGTTGTCAAGCAACGAATGCAAACTGGGCAGTTTACGTCAGCATCTAATGCTGTCCGCTTTATTGCATCTAAGGAGGGCTTTAGAGGATTTTATGCTGGGTATGGATCTTTTTTACTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCCTCTATGAGCAGATTCGATTAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCCGTTATTGGTGCTTTTGCAGGCGCACTAACCGGAGCAATAACTACGCCCCTTGATGTCATCAAGACAAGGTTAATGATTCAGGGACCTGCAAACCAATATAAGGGAATTGTGGATTGCGTTCAAACCATTATTAAGGAAGAGGGACCTGGTGCTTTTTTGAAGGGTATTGGGCCAAGAGTACTTTGGATAGGCATAGGTGGTTCAATATTCTTTGGCGTCCTTGAGAGTTCAAAACGTTTCCTTGCTGAGAGGCGTCCTACAAAAGCTCCGCGCATAAACTCAGAAAAAAGTGAAGATTAA 975 0.4349 MAPLTLSVKPQDSSISDASTKRKQNLNVRNCFASVTVGQENPFDFLRTLIEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLVLKGLYSGLAGNLAGVLPASALFVGVYEPVKQKLLRMFPENLSAFAHLTAGAIGGIAASFVRVPTEVVKQRMQTGQFTSASNAVRFIASKEGFRGFYAGYGSFLLRDLPFDAIQFCLYEQIRLGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMIQGPANQYKGIVDCVQTIIKEEGPGAFLKGIGPRVLWIGIGGSIFFGVLESSKRFLAERRPTKAPRINSEKSED 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04350 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 210 IPR018108 -
Vivi5g04350 324 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 21 313 - -
Vivi5g04350 324 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g04350 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 119 IPR018108 -
Vivi5g04350 324 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Vivi5g04350 324 PRINTS Mitochondrial carrier protein signature 65 79 IPR002067 GO:0055085
Vivi5g04350 324 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Vivi5g04350 324 PRINTS Mitochondrial carrier protein signature 52 65 IPR002067 GO:0055085
Vivi5g04350 324 Pfam Mitochondrial carrier protein 50 83 IPR018108 -
Vivi5g04350 324 Pfam Mitochondrial carrier protein 128 209 IPR018108 -
Vivi5g04350 324 Pfam Mitochondrial carrier protein 223 308 IPR018108 -
Vivi5g04350 324 Gene3D Mitochondrial carrier domain 44 320 IPR023395 -
Vivi5g04350 324 SUPERFAMILY Mitochondrial carrier 51 300 IPR023395 -
Vivi5g04350 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 305 IPR018108 -
Vivi5g04350 324 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 51 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04350 Vivi-Chr5 141012806 141018544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04350 126 321 Chloroplast and Mitochondria Gene Families AT1G07030 30.846 4.98e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04350 K15111 - gmx:100811130 538.11