Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04322 ATGGAGTTGAAGGGTCACTTTCCACGTGGCATTGTCAACTGCTCTTCGCTGACCGGCTTAGACCTTTCAAACAATGAGCTCTCAGGAACCATTCCATCTGATATATCAAACATTCTCCCATATGTTACCACTATTGATCTCTCTTATAACAAATTCACAGATGCAATTCCAACATCTTTAGCAAACTGTATTTACCTGAATATCCTTAAACTTGACCATAACTTGTTAAGCGGTGAAATTCCAAAACAACTTGGCCAACTTAGCAGGCTTAAAGAGATTTCTGTTTCTAACAATCAGTTATCAGAGTCACTACCTGTGTTCTCAGAAAAGGTAAATTTCAACTATGCTAACAATAGTAGACTTTGTGGAGGGTCTTTGAGACATTGCTCCTTGACACGTGACAAGCACGGAGATTTTTATCATTCGTTTAAGGATGGTCTTATTGTTGGCTATGTTTCTCTCTTTTTTTTTGTTATGGTCACTTGTATGTTCTACTCCAAATTTGCACATTGGGTGCATAAGTTGAAAACGAAAAATAATGACCTAAACAAAGCTATAGAATTGGGCCAATATATTTGCTCCATCATTAGCATAAGGAAACAGATGGTAGTTAATCAGATACATGAACTGTTATATATGTGGCTAGCATTCAAAGAAAGAAAAGAGATCTCTGTACTATGTGAAAGATTGACCTCAACAATATGGCTAGAAGAACTACGTGATGCAACAAATTGTTTCTCTATCGACAATGCCATTGGAGTAGGAAAGATGGGAATGATGTACGAAGGATTTATGCCTAATGGTAAGTTACTAGCTGTTAAGAGACTATTTGACTCTCGAAAATTTAAAAGGCAGTTCCTTTTAGAAACAACGATTTTGTGCAAATACAGACACCAAAATATCATTCCCTTGCTTGGGTTCTGCATTGAAGGAAAGGAAAGGCTTTTGACATATGCATACATGCCAAATGGAAGGCTTTCCAAATGGTTGTATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCAGGAAAGAGTGAACATTGCACTTGGAATAGCTAGAGGATTATCATGGCTACATCATACATGTGAGTTGTGCATAGTGCATTTTAATATATGTTCCGAATGCATATTACTAGATGAAAACTTTGAACCCAAAATATCTAATTTCGGAGAGGCGAAATTTATGAATCCCGACACTGAAGATCATCTAGGGGTGATATTTAAAGCTAATGATGGAAAGAAGGATGTATATGACTTTGGAAGTGTTCTTTTTGAATTGATTACAGGGAAAACATATGATGAATTGTCTCATTCATATGACACTACTAATATACGTGGTAACCCTTTGAGTTTTTATAATATTATTGATAAATCTCTGACTAGTCAAGGACTTGACAATGAAGTTTGTACTCTTCTAAAGATTGCTTGTGAGTGTGTTAAATCTTTACCAGACCAGAGACCAACAATGCTTGAAATTTACAACAGTATTAGCAATGTAAGGAAGGGACGAAATGGCAATGGTGATGATAATGACACATTAAAGGAATTAGAAGGTACTTCTTCTATTACTATGGATGAAATTATTGAGGTTTAA 1596 0.3578 MELKGHFPRGIVNCSSLTGLDLSNNELSGTIPSDISNILPYVTTIDLSYNKFTDAIPTSLANCIYLNILKLDHNLLSGEIPKQLGQLSRLKEISVSNNQLSESLPVFSEKVNFNYANNSRLCGGSLRHCSLTRDKHGDFYHSFKDGLIVGYVSLFFFVMVTCMFYSKFAHWVHKLKTKNNDLNKAIELGQYICSIISIRKQMVVNQIHELLYMWLAFKERKEISVLCERLTSTIWLEELRDATNCFSIDNAIGVGKMGMMYEGFMPNGKLLAVKRLFDSRKFKRQFLLETTILCKYRHQNIIPLLGFCIEGKERLLTYAYMPNGRLSKWLYPLESEVIRLKWQERVNIALGIARGLSWLHHTCELCIVHFNICSECILLDENFEPKISNFGEAKFMNPDTEDHLGVIFKANDGKKDVYDFGSVLFELITGKTYDELSHSYDTTNIRGNPLSFYNIIDKSLTSQGLDNEVCTLLKIACECVKSLPDQRPTMLEIYNSISNVRKGRNGNGDDNDTLKELEGTSSITMDEIIEV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04322 531 ProSiteProfiles Protein kinase domain profile. 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04322 531 Gene3D Ribonuclease Inhibitor 1 137 IPR032675 -
Vivi5g04322 531 SUPERFAMILY L domain-like 3 131 - -
Vivi5g04322 531 SUPERFAMILY Protein kinase-like (PK-like) 228 495 IPR011009 -
Vivi5g04322 531 FunFam Piriformospora indica-insensitive protein 2 7 106 - -
Vivi5g04322 531 Gene3D Transferase(Phosphotransferase) domain 1 321 521 - -
Vivi5g04322 531 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 109 - -
Vivi5g04322 531 Gene3D Phosphorylase Kinase; domain 1 211 320 - -
Vivi5g04322 531 Pfam Protein tyrosine and serine/threonine kinase 248 496 IPR001245 GO:0004672|GO:0006468
Vivi5g04322 531 Pfam Leucine rich repeat 41 100 IPR001611 GO:0005515
Vivi5g04322 531 PRINTS Leucine-rich repeat signature 87 100 - -
Vivi5g04322 531 PRINTS Leucine-rich repeat signature 17 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04322 Vivi-Chr5 140682452 140687749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04322 1 500 Receptor kinase-like Gene Family AT1G27190 33.837 7.56e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi5g04322 PK_Tyr_Ser-Thr 2.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04322 - - psat:127106772 818.15