Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04293 ATGGCTCCTCGGAACCAGAATAGGCCTCCGCGGAATCACCCCGATAAAAAGGATAGTGCTGAAGAAATTGAAGGTGAAAAGATGGGAAGAGCCAGGGCGCCTTTAACTGCGGTGGTGAACAATGCCAGTACCAGTAACACAGAGGGAATGGAATCTAACACGATTGAGTTCACAAAAGAGGATGTAGAGGCATTGCTCAATGAGAAGATGAAAAAGGGGATGACTCCCCTTGATTACAAGAAAAAAATGGATCAAATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGCTTCAATGAAAATGAAAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGTGATACCGAGATTGAGATGGAGAATAAGACTGAGGAGCTGAGTGATACTATATCCAATATGAGAAACATGATTTCTTCCTTAGAAGAGATAAATGCAAAGGAAAAGTCGGAAAAGTTGGTAGCAATTGATGATAAAATGAAACTACAACAGTGCAATAGTAATCTTCAATTAGATCTTAAATCAGCTAATGAGGCTTATAGACGACTTGACACGGAGAAAACAATCATTGTTGAGAGCCTTAATGCTACAAAAGATCTTAATAAGGAATTGCAGGATCGATTGAAATCTCTTAAAGATTCACACAGTGAAGCTATAAAGAAGAAAGAAATGTTAGCAAACGAAGTTATATGTCTCCGTGAAGAACTTAAAAAAATAATGGATGATCGTGATCGCCTACAAGGACAACTAAATGCTATAATGTTAGAACGAGAAAAATACATAAAATTTAAATATGAAACATTTTCAAAATTGGATAAATTGGCAAGTAAAACAGAGGCACTAGAGAATACTTGTTCCTCTCAAAAGGAGAAAATTACTTTACTGGAGAAAAAGTTATGCGATGAAAGGGAGAAACTAGAGATGGCTGATTTATCTGCTTTGAAAACAAAAGAAATGTTTGAAGAGAAACAAAGTATCATTCGTGAACTACAAGATCAGTTGGCAGATAAAGAATTTCAAATAGTTGAAGGGGAAAAGTTAAGAAAAAAACTGCACAACACTATATTGGAGCTGAAAGGAAATATTCGTGTGTTTTGTCGTGTGCGTCCTTTACTACGGGAGGATCGTTCCGAAACAGACATGGTTGTTTCTTATCCAACGTCAATAGAAATGCTTGGCCGGGGCATTGAGTTAGGTCAAAATGCAGGACAGAAACACCTTTTTACATTTGACAAGGTGTTTAATCATGATGCCTCTCAGCATGATGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGTTACAAGGTATGCATTTTTGCTTATGGACAGACGGGTTCAGGAAAAACCTACACAATGGTGGGTAGACCTGACGCTCCAGATCTGAAAGGAATGATTCCACTTTCTTTAGAACAAATATTCCAGACAAGTCAGTCTCTTAAAGACCAGGGCTGGAATTACAAAATGCAGGTATCAGTATTGGAAATATATAACGAGACCATCAAAGATTTGTTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGCGTTCACGGAAAACAATATTCTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACAATTGTCGATGTTTGTAGTCCTGCTGAAATTTCCTCCCTTTTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACGCAAATGAATGAACAATCATCTAGAAGCCACTTTGTCGTTACTCTGCGAATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTTATTGATTTGGCGGGAAGTGAAAGACTTTCAAGGAGTGGAGCTACTGGGGACCGTTTGAAGGAAGCTCAGGCTATTAACCAAAGTCTCTCCTCTTTGAGCAATGTTATATTTGCTTTGGCAAAGAAAGAAGATCATGTACCTTTTAGGGATTCAAAACTCACACACCTACTCCAGCCATCTCTTGAAGGGGATTCCAAAACTTTGATGTTCGTCAACATCTCACCTGATCAATCTTCAATTGACGAGTCACTTTGCTCTCTTCGGTTTGCTGCTAGAGTGAATGCTGTGAAATTGGGGTCTCAAAGCTTAAGACCTAAGCATTAA 2154 0.3863 MAPRNQNRPPRNHPDKKDSAEEIEGEKMGRARAPLTAVVNNASTSNTEGMESNTIEFTKEDVEALLNEKMKKGMTPLDYKKKMDQMVDLIKRLKLCVRWCFNENEKLHSEVESAVKKCCDTEIEMENKTEELSDTISNMRNMISSLEEINAKEKSEKLVAIDDKMKLQQCNSNLQLDLKSANEAYRRLDTEKTIIVESLNATKDLNKELQDRLKSLKDSHSEAIKKKEMLANEVICLREELKKIMDDRDRLQGQLNAIMLEREKYIKFKYETFSKLDKLASKTEALENTCSSQKEKITLLEKKLCDEREKLEMADLSALKTKEMFEEKQSIIRELQDQLADKEFQIVEGEKLRKKLHNTILELKGNIRVFCRVRPLLREDRSETDMVVSYPTSIEMLGRGIELGQNAGQKHLFTFDKVFNHDASQHDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMVGRPDAPDLKGMIPLSLEQIFQTSQSLKDQGWNYKMQVSVLEIYNETIKDLLSNRSSGFDQTRAENSVHGKQYSIRHDKNGNTHVLDLTIVDVCSPAEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKEAQAINQSLSSLSNVIFALAKKEDHVPFRDSKLTHLLQPSLEGDSKTLMFVNISPDQSSIDESLCSLRFAARVNAVKLGSQSLRPKH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04293 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 705 IPR027417 -
Vivi5g04293 717 Gene3D Kinesin motor domain 308 708 IPR036961 -
Vivi5g04293 717 Coils Coil 325 352 - -
Vivi5g04293 717 Coils Coil 199 261 - -
Vivi5g04293 717 Coils Coil 136 156 - -
Vivi5g04293 717 Coils Coil 171 191 - -
Vivi5g04293 717 CDD KISc_C_terminal 364 708 - -
Vivi5g04293 717 MobiDBLite consensus disorder prediction 9 29 - -
Vivi5g04293 717 FunFam Kinesin-like protein 312 708 - -
Vivi5g04293 717 Pfam Kinesin motor domain 372 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 ProSitePatterns Kinesin motor domain signature. 606 617 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi5g04293 717 ProSiteProfiles Kinesin motor domain profile. 366 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 MobiDBLite consensus disorder prediction 1 33 - -
Vivi5g04293 717 PRINTS Kinesin heavy chain signature 442 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 PRINTS Kinesin heavy chain signature 656 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 PRINTS Kinesin heavy chain signature 576 593 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 PRINTS Kinesin heavy chain signature 607 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 SMART kinesin_4 364 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g04293 717 Coils Coil 276 303 - -
Vivi5g04293 717 PANTHER KINESIN-LIKE PROTEIN KLP-3 106 711 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04293 Vivi-Chr5 140159756 140165177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04293 274 706 Calmodulin-binding Proteins AT5G65930 36.490 1.52e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04293 K10405 - gmx:100818473 860.522