Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi5g04242 | ATGGGCAAGATCATAGGATTCAATGTTTCATTTTTTATGTTGTTGTTATTGTTTTTGTCTTTCCTATGTTTTTATCCTTTGTTTTTGCATGCTGCTTCCTCCATCACACAGAATGAATCTATCAAAGATGGTTCTACTTTGGTCTCAGAAGGTCTCAAATTCGAAATGGGTTTCTTCGGCTTAAACAACTCTTCAAGATACGTTGGAATTTGGTATCGCAACGTTTCGGTTTCAGCATACGTGTGGGTTGCAAACAGAGAAAATCCTATTAAAAACAGACAAGGTTCCATCACAATAAAAAAGGATGGTAACTTGGTAGTTCTTGATGGAGAGAACAACGAGGTTTGGTCAAGTAATATATCAGTTCCTATAAATAACTCGCAAGCTGTTCTTCGTAATGATGGAAACCTTATTCTTTCGGATAGAGAAACTAACAAGGAGATTTGGCAAACTTTTGAAGATCCAACTGATACATATCTTCCAGGTATGAAAGTTCCCGCGAGTAGCGGAGGTGGAATCGGGAAGGATCCTACCTTTCGTGCGTGGAAATCAGAGAAGGATCCTTCATTCGGAAAATACACGATGAGTGTTGATTCGGAAGCCTCACCACAGATAGTGATTATGAAAGGTGAGAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCTCAGGTGTGCCAAATATGACAGGAAATTATCTTTATGGTTTTAGGCTTAACACGGACGATAAGGGAGAAAGGTATTTTGTTTATGAAGCATTGAATAGTAGTGATAAGATAAGGTTTCAGATTGCTTATGATGGATTTGAGAGACAATTCAGGTGGAATGAAAATGAAAAAAAATGGAATGTGATACAAAGTCTTCCTTATAAGAAGTGTGAGTTTTATAATTCATGTGGTAGTTTCGCAATATGTGATGAGTCTGATTCAGTTTTGTGTAAGTGCTTGAAAGGGTTTGAGCCAAAGGATATGATAAGTTGGAAAAATGGGAATTGGTCAAAAGGGTGTAAGAGGAAGAATCCATTGAAGGGTGAGAGAACTAGTACTAATAGTTCTGTTGGAGAAGATGGTTTTTTGGTGCAAAGGGGTTTGAAGTTGCCTGATTTTGCACATTTGGTTAATGCTGGTAATAGCGATGACTGTGAAAGAAATTGTCTGCAGAATAGTTCTTGTACCGCGTATGTAAACACTATTGGAATTGGGTGTATGGTTTGGTTTGGAGAGTTAGTTGATGTTCAAAGACTAGAAATTTATGGAAATACACTCAACATTCGGCTTTCCGATTCTGATCTAGATGATGCGAAGAAAAAGACCAAGATTTGGATAACATTAGCTGTTGTAATGGCGGTTATCTTTCTTGGAATTTTTGCATGGCTGCTATGGAGATTTAAGGGAAAACTCAAAGTCTCTTCGACTTCTTCTCTCAACAGAAACATTGGTAATGGAACAGTTTCTGAACCATCCAAAAGTACAAACTTATTAGTACCAGCAGAATTTTCAGGATCAGTTGATCCGAATTCGGAAGGGAGTCCTCTAAATAATGCAGAACTTTCATTCTTCAATTTTAGTAGCATTGTAATAGCAACAAACAATTTCTCAGAAGAAAATAAACTCGGACAAGGGGGATTCGGTCCTGTCTACAAGGGAAAGCTTCCAGGGGGAGAAGAAATCGCGGTAAAGAGGCTTTGTAGAAAGTCTAGCCAAGGTTCAGATGAGTTCAAGAATGAAATGATGCTAATAGCCAAATTACAACATAGAAATCTTGTTAGACTGTTAGGATGTTCAGTTCTAGAGGAAGAAAAGTTACTGGTATATGAATACATGCCAAACAAAAGTCTAGACTTTTTTTTATTTGATCCAGTCAAGCAAACAAAACTAGATTGGACTATACGTTCTGAAATCATCGAGGGTATTGCTAGAGGACTACTTTATCTGCACCGTGATTCACGGCTTAGAATAATTCATCGGGATCTAAAAGCAAGCAACATTTTGTTGGACGAAAATATGAATCCAAAAATATCAGACTTTGGCTTGGCAAGGATATTTGGTGGAAACCAAAATGAAGACAATACAACTAGAGTAGTTGGTACATATGGTTACATGTCTCCTGAATATGCGATGGAAGGTCTATTTTCAGTTAAATCTGATGTCTATAGTTTTGGCGTACTTCTACTAGAGATTGTGAGTGGTCGCAAAAACACTAGCTTTCGTGATTCTTATGATCCAAGTCTCATAGGATATGCATGGCGTCTATGGAATGAAGAGAGAGTGATGGAGCTTGTTGATCCTTCGATCCGTGATTCATGTAAAAAGAGTAAAGCATTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTAATAGACCAAACATGTCCTCAGTGGTATTGATGCTGGAAAGTGAGGCAACAACTCTTCCATTGCCTATTCAACCTTTGTTTACTTCAATGAGGAGATATGATGATACTGAAGAATTTCATACCGAACCCTTTGAATCCTCAGTTGATCTTACAGTGACAGGGAGATAA | 2544 | 0.3789 | MGKIIGFNVSFFMLLLLFLSFLCFYPLFLHAASSITQNESIKDGSTLVSEGLKFEMGFFGLNNSSRYVGIWYRNVSVSAYVWVANRENPIKNRQGSITIKKDGNLVVLDGENNEVWSSNISVPINNSQAVLRNDGNLILSDRETNKEIWQTFEDPTDTYLPGMKVPASSGGGIGKDPTFRAWKSEKDPSFGKYTMSVDSEASPQIVIMKGEKRRWRSGYWDGRVFSGVPNMTGNYLYGFRLNTDDKGERYFVYEALNSSDKIRFQIAYDGFERQFRWNENEKKWNVIQSLPYKKCEFYNSCGSFAICDESDSVLCKCLKGFEPKDMISWKNGNWSKGCKRKNPLKGERTSTNSSVGEDGFLVQRGLKLPDFAHLVNAGNSDDCERNCLQNSSCTAYVNTIGIGCMVWFGELVDVQRLEIYGNTLNIRLSDSDLDDAKKKTKIWITLAVVMAVIFLGIFAWLLWRFKGKLKVSSTSSLNRNIGNGTVSEPSKSTNLLVPAEFSGSVDPNSEGSPLNNAELSFFNFSSIVIATNNFSEENKLGQGGFGPVYKGKLPGGEEIAVKRLCRKSSQGSDEFKNEMMLIAKLQHRNLVRLLGCSVLEEEKLLVYEYMPNKSLDFFLFDPVKQTKLDWTIRSEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEDNTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRDSYDPSLIGYAWRLWNEERVMELVDPSIRDSCKKSKALRCIHIGMLCVQDSASNRPNMSSVVLMLESEATTLPLPIQPLFTSMRRYDDTEEFHTEPFESSVDLTVTGR | 847 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi5g04242 | 847 | SMART | serkin_6 | 534 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi5g04242 | 847 | SMART | ntp_6 | 355 | 428 | IPR003609 | - | |
Vivi5g04242 | 847 | CDD | B_lectin | 38 | 155 | IPR001480 | - | |
Vivi5g04242 | 847 | Pfam | D-mannose binding lectin | 80 | 171 | IPR001480 | - | |
Vivi5g04242 | 847 | Gene3D | - | 28 | 152 | IPR036426 | - | |
Vivi5g04242 | 847 | PIRSF | SRK | 7 | 846 | IPR024171 | GO:0004674 | |
Vivi5g04242 | 847 | ProSiteProfiles | Bulb-type lectin domain profile. | 32 | 152 | IPR001480 | - | |
Vivi5g04242 | 847 | Pfam | PAN-like domain | 356 | 414 | IPR003609 | - | |
Vivi5g04242 | 847 | CDD | PAN_AP_plant | 353 | 429 | - | - | |
Vivi5g04242 | 847 | CDD | STKc_IRAK | 540 | 805 | - | - | |
Vivi5g04242 | 847 | Pfam | Protein tyrosine and serine/threonine kinase | 537 | 802 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi5g04242 | 847 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 28 | 152 | - | - | |
Vivi5g04242 | 847 | SMART | blect_4 | 38 | 155 | IPR001480 | - | |
Vivi5g04242 | 847 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 610 | 812 | - | - | |
Vivi5g04242 | 847 | SUPERFAMILY | Protein kinase-like (PK-like) | 520 | 834 | IPR011009 | - | |
Vivi5g04242 | 847 | Gene3D | Transferase(Phosphotransferase) domain 1 | 610 | 811 | - | - | |
Vivi5g04242 | 847 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 501 | 609 | - | - | |
Vivi5g04242 | 847 | ProSiteProfiles | Protein kinase domain profile. | 534 | 819 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi5g04242 | 847 | Pfam | S-locus glycoprotein domain | 215 | 324 | IPR000858 | GO:0048544 | |
Vivi5g04242 | 847 | ProSiteProfiles | PAN/Apple domain profile. | 338 | 424 | IPR003609 | - | |
Vivi5g04242 | 847 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 17 | 795 | - | - | |
Vivi5g04242 | 847 | Gene3D | Phosphorylase Kinase; domain 1 | 505 | 609 | - | - | |
Vivi5g04242 | 847 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 655 | 667 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi5g04242 | 847 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 79 | 222 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi5g04242 | Vivi-Chr5 | 139378906 | 139383815 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi5g04242 | 507 | 819 | Receptor kinase-like Gene Family | AT4G23230 | 60.828 | 1.65e-132 | 407 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vivi5g04242 | PK_Tyr_Ser-Thr | 1.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi5g04242 | - | - | cam:101504189 | 1342.02 |